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千屈菜科紫薇属植物的完整叶绿体基因组。

The complete chloroplast genome of Kurz (Lythraceae).

作者信息

Sangsrakru Duangjai, Sonthirod Chutima, Nawae Wanapinun, Yundaeng Chutintorn, Promchoo Waratthaya, Pootakham Wirulda, Tangphatsornruang Sithichoke

机构信息

National Omics Center, National Science and Technology Development Agency (NSTDA), Pathum Thani, Thailand.

Department of Marine and Coastal Resources, Royal Thai Government Ministry of Natural Resources and Environment, Bangkok, Thailand.

出版信息

Mitochondrial DNA B Resour. 2022 Oct 3;7(10):1761-1763. doi: 10.1080/23802359.2022.2119818. eCollection 2022.

Abstract

Kurz is a critically endangered mangrove species that can be found along the western coast of Thailand. In this study, we reported the complete chloroplast genome of . The chloroplast genome is 152,730 bp, consisting of one large single-copy (LSC) region, one small single-copy (SSC) region and a pair of inverted repeats (IRs). The LSC, SSC, and IR lengths are 87,226, 17,764, and 23,870 bp, respectively. The genome contains 113 unique genes, including 79 protein-coding, 30 tRNA, and 4 rRNA genes. The GC content of the chloroplast genome is 37.31%. The phylogenetic analysis based on 76 protein-coding genes showed a monophyletic group of and other species.

摘要

库尔兹是一种极度濒危的红树林物种,可在泰国西海岸发现。在本研究中,我们报道了[物种名称]的完整叶绿体基因组。叶绿体基因组为152,730 bp,由一个大单拷贝(LSC)区域、一个小单拷贝(SSC)区域和一对反向重复序列(IRs)组成。LSC、SSC和IR的长度分别为87,226、17,764和23,870 bp。该基因组包含113个独特基因,包括79个蛋白质编码基因、30个tRNA基因和4个rRNA基因。叶绿体基因组的GC含量为37.31%。基于76个蛋白质编码基因的系统发育分析显示,[物种名称]与其他[物种数量]个物种形成一个单系群。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fe5e/9553166/7b12c866c09e/TMDN_A_2119818_F0001_C.jpg

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