Singh Atul Kumar, Prajapati Kumari Sunita, Kumar Shashank
Molecular Signaling & Drug Discovery Laboratory, Department of Biochemistry, Central University of Punjab, Bathinda, Punjab, India.
J Biomol Struct Dyn. 2023 Oct-Nov;41(17):8432-8444. doi: 10.1080/07391102.2022.2134213. Epub 2022 Oct 13.
Gamma secretase (GS) produces Notch Intracellular Domain (NICD) by trans-membrane cleavage of notch receptor. The NICD enters the nucleus and activates the notch signaling pathway (NSP) by activating notch-responsive gene transcription. Hyperactivation of NSP is related to cancer aggressiveness, therapy resistance, and poor therapy outcome, and decreased overall disease-free survival in patients. Till date, none of the GS inhibitors (GSI) has been clinically approved due to their toxicity in patients. Thus in the present study, we explored the GS catalytic site binding potential of hesperidin (natural flavone glycoside) and its effect on notch responsive gene expression in HCT-116 cells. Molecular docking, MM-GBSA binding energy calculations, and molecular dynamics (MD) simulation experiments were performed to study the GS catalytic site binding potential of hesperidin. The compound showed better GS catalytic site binding potential at the active site compared to experimentally validated GSI, N-N-(3, 5-Difluorophenacetyl)-L-alanyl-S-phenylglycine t-butyl ester (DAPT) in molecular docking and MM-GBSA experiments. MD simulation results showed that hesperidin forms stable and energetically favorable complex with gamma secretase in comparison to standard inhibitor (DAPT)-GS complex. Further, experiments showed that hesperidin inhibited cell growth and sphere formation potential in HCT-116 cells. Further, hesperidin treatment altered notch responsive genes (Hes1, Hey1, and E-cad) and cancer stemness/self-renewal markers expression at transcription levels. In conclusion, hesperidin produces toxicity in HCT-116 cells and decreases colonosphere formation by inhibiting transcription of notch signaling pathway target genes and stemness markers.Communicated by Ramaswamy H. Sarma.
γ-分泌酶(GS)通过对Notch受体进行跨膜切割产生Notch细胞内结构域(NICD)。NICD进入细胞核并通过激活Notch反应性基因转录来激活Notch信号通路(NSP)。NSP的过度激活与癌症侵袭性、治疗抗性和不良治疗结果相关,并降低患者的总体无病生存率。迄今为止,由于GS抑制剂(GSI)对患者有毒性,尚无一种被临床批准。因此,在本研究中,我们探究了橙皮苷(天然黄酮苷)与GS催化位点的结合潜力及其对HCT-116细胞中Notch反应性基因表达的影响。进行了分子对接、MM-GBSA结合能计算和分子动力学(MD)模拟实验,以研究橙皮苷与GS催化位点的结合潜力。在分子对接和MM-GBSA实验中,与经实验验证的GSI N-N-(3,5-二氟苯乙酰基)-L-丙氨酰-S-苯甘氨酸叔丁酯(DAPT)相比,该化合物在活性位点显示出更好的GS催化位点结合潜力。MD模拟结果表明,与标准抑制剂(DAPT)-GS复合物相比,橙皮苷与γ-分泌酶形成稳定且能量有利的复合物。此外,实验表明橙皮苷抑制HCT-116细胞的生长和球体形成潜力。此外,橙皮苷处理在转录水平上改变了Notch反应性基因(Hes1、Hey1和E-cad)以及癌症干性/自我更新标志物的表达。总之,橙皮苷在HCT-116细胞中产生毒性,并通过抑制Notch信号通路靶基因和干性标志物的转录来减少结肠球形成。由Ramaswamy H. Sarma传达。