Szymanski Christine M
Department of Microbiology and Complex Carbohydrate Research Center, University of Georgia, Athens, GA, United States.
Front Mol Biosci. 2022 Sep 30;9:1015771. doi: 10.3389/fmolb.2022.1015771. eCollection 2022.
Each microbe has the ability to produce a wide variety of sugar structures that includes some combination of glycolipids, glycoproteins, exopolysaccharides and oligosaccharides. For example, bacteria may synthesize lipooligosaccharides or lipopolysaccharides, teichoic and lipoteichoic acids, N- and O-linked glycoproteins, capsular polysaccharides, exopolysaccharides, poly-N-acetylglycosamine polymers, peptidoglycans, osmoregulated periplasmic glucans, trehalose or glycogen, just to name a few of the more broadly distributed carbohydrates that have been studied. The composition of many of these glycans are typically dissimilar from those described in eukaryotes, both in the seemingly endless repertoire of sugars that microbes are capable of synthesizing, and in the unique modifications that are attached to the carbohydrate residues. Furthermore, strain-to-strain differences in the carbohydrate building blocks used to create these glycoconjugates are the norm, and many strains possess additional mechanisms for turning on and off transferases that add specific monosaccharides and/or modifications, exponentially contributing to the structural heterogeneity observed by a single isolate, and preventing any structural generalization at the species level. In the past, a greater proportion of research effort was directed toward characterizing human pathogens rather than commensals or environmental isolates, and historically, the focus was on microbes that were simple to grow in large quantities and straightforward to genetically manipulate. These studies have revealed the complexity that exists among individual strains and have formed a foundation to better understand how other microbes, hosts and environments further transform the glycan composition of a single isolate. These studies also motivate researchers to further explore microbial glycan diversity, particularly as more sensitive analytical instruments and methods are developed to examine microbial populations rather than in large scale from an enriched nutrient flask. This review emphasizes many of these points using the common foodborne pathogen as the model microbe.
每种微生物都有能力产生多种糖结构,这些糖结构包括糖脂、糖蛋白、胞外多糖和寡糖的某种组合。例如,细菌可能合成脂寡糖或脂多糖、磷壁酸和脂磷壁酸、N-连接和O-连接糖蛋白、荚膜多糖、胞外多糖、聚-N-乙酰葡糖胺聚合物、肽聚糖、渗透调节周质葡聚糖、海藻糖或糖原,这里仅列举了一些已被研究的分布较广的碳水化合物。这些聚糖中的许多成分通常与真核生物中描述的不同,这体现在微生物能够合成的看似无穷无尽的糖类库中,以及连接在碳水化合物残基上的独特修饰上。此外,用于构建这些糖缀合物的碳水化合物构建块在菌株之间存在差异是常态,许多菌株还拥有开启和关闭添加特定单糖和/或修饰的转移酶的额外机制,这极大地增加了单个分离株所观察到的结构异质性,并阻碍了在物种水平上进行任何结构归纳。过去,更大比例的研究工作致力于表征人类病原体而非共生菌或环境分离株,并且从历史上看,重点是易于大量培养且易于进行基因操作的微生物。这些研究揭示了各个菌株之间存在的复杂性,并为更好地理解其他微生物、宿主和环境如何进一步改变单个分离株的聚糖组成奠定了基础。这些研究也促使研究人员进一步探索微生物聚糖的多样性,特别是随着更灵敏的分析仪器和方法的开发,以检查微生物群体,而不是从富集营养瓶中大规模培养。本综述以常见的食源性病原体作为模型微生物强调了其中的许多要点。