Li Shijie, Wang Yantong, Ge Wei, Zhang Wei, Lu Biao, Feng Feiyang, Ni Caihong, Xiao Shou-Jun
State Key Laboratory of Coordination Chemistry, School of Chemistry and Chemical Engineering, Nanjing University, 163 Xianlin Ave., Nanjing, Jiangsu, 210023, P.R. China.
Chemistry. 2023 Jan 12;29(3):e202202863. doi: 10.1002/chem.202202863. Epub 2022 Nov 23.
By rationally adjusting the weaving modes of point-star tiles, the curvature inherent in the tiles can be changed, and various DNA nanostructures can be assembled, such as planar wireframe meshes, perforated wireframe tubes, and curved wireframe polyhedra. Based on the weaving and tiling architectures for traditional point-star tiles with the core arm length at two DNA half-turns, we improved the weaving modes of our newly reported four-point-star tiles with the core arm length at three half-turns to adjust their curvature and rigidity for assembling 2D arrays of DNA grids and tubes. Following our previous terms and methods to analyze the structural details of E-tiling tubes, we used the chiral indices (n,m) to describe the most abundant tube of typical assemblies; especially, we applied both one-locus and/or dual-locus biotin/streptavidin (SA) labelling strategies to define the configurations of two specific tubes, along with the absolute conformations of their component tiles. Such structural details of the DNA tubes composed of tiles with addressable concave and convex faces and packing directions should help us understand their physio-chemical and biological properties, and therefore promote their applications in drug delivery, biocatalysis, biomedicine, etc.
通过合理调整点星瓷砖的编织模式,可以改变瓷砖固有的曲率,并能组装各种DNA纳米结构,如平面线框网格、穿孔线框管和弯曲线框多面体。基于传统点星瓷砖的编织和平铺结构(核心臂长度为两个DNA半圈),我们改进了新报道的核心臂长度为三个半圈的四点星瓷砖的编织模式,以调整其曲率和刚性,用于组装DNA网格和管的二维阵列。按照我们之前分析E型平铺管结构细节的术语和方法,我们使用手性指数(n,m)来描述典型组件中最丰富的管;特别是,我们应用单位点和/或双位点生物素/链霉亲和素(SA)标记策略来定义两种特定管的构型,以及它们组成瓷砖的绝对构象。由具有可寻址凹凸面和堆积方向的瓷砖组成的DNA管的这种结构细节,应有助于我们了解其物理化学和生物学特性,从而促进它们在药物递送、生物催化、生物医学等方面的应用。