长链非编码 RNA CARMN 通过调控 miR-192-5p/LOXL2 轴影响肝细胞癌预后。
LncRNA CARMN Affects Hepatocellular Carcinoma Prognosis by Regulating the miR-192-5p/LOXL2 Axis.
机构信息
Department of Pharmacy, Shenzhen Longhua District Central Hospital, Shenzhen, China.
Guangdong Provincial Key Laboratory of Research and Development of Natural Drugs, and School of Pharmacy, Guangdong Medical University, Dongguan, China.
出版信息
Oxid Med Cell Longev. 2022 Oct 8;2022:9277360. doi: 10.1155/2022/9277360. eCollection 2022.
BACKGROUND
Hepatocellular carcinoma (HCC) is aggressive cancer with a poor prognosis. It has been suggested that the aberrant expression of LOXL2 is associated with the development of HCC, but the exact mechanism remains unclear. This research is aimed at examining the expression level and prognostic value of LOXL2 in hepatocellular carcinoma and its relationship with immune infiltration and at predicting its upstream noncoding RNAs (ncRNAs).
METHOD
The transcriptome data of HCC was first downloaded from The Cancer Genome Atlas (TCGA) database to investigate the expression and prognosis of LOXL2. Then, the starBase database was used to find the upstream ncRNAs of LOXL2, and correlation analysis and expression analysis were performed. Finally, the Tumor Immune Estimation Resource (TIMER) was used to explore the association between LOXL2 and immune cell infiltration.
RESULT
CARMN was considered to be the potential upstream lncRNA for the hsa-miR-192-5p/LOXL2 axis in HCC. Furthermore, the level LOXL2 was markedly positively associated with tumor immune cell infiltration and immune checkpoint expression in HCC.
CONCLUSION
Higher expression of LOXL2 mediated by microRNA (miRNA) and long noncoding RNAs (lncRNA) is associated with poor overall survival (OS), immune infiltration, and immune checkpoint expression in HCC.
背景
肝细胞癌(HCC)是一种侵袭性癌症,预后不良。已经有研究表明,LOXL2 的异常表达与 HCC 的发生发展有关,但具体机制尚不清楚。本研究旨在检测 LOXL2 在肝细胞癌中的表达水平和预后价值,及其与免疫浸润的关系,并预测其上游非编码 RNA(ncRNA)。
方法
首先从癌症基因组图谱(TCGA)数据库中下载 HCC 的转录组数据,以研究 LOXL2 的表达和预后。然后,使用 starBase 数据库寻找 LOXL2 的上游 ncRNA,并进行相关性分析和表达分析。最后,使用肿瘤免疫估计资源(TIMER)探讨 LOXL2 与免疫细胞浸润的关系。
结果
CARMN 被认为是 HCC 中 hsa-miR-192-5p/LOXL2 轴的潜在上游 lncRNA。此外,LOXL2 的水平与 HCC 中的肿瘤免疫细胞浸润和免疫检查点表达呈显著正相关。
结论
由 microRNA(miRNA)和长非编码 RNA(lncRNA)介导的 LOXL2 高表达与 HCC 患者总生存期(OS)不良、免疫浸润和免疫检查点表达有关。