Jacobus Ana P, Barreto Joneclei A, de Bem Lucas S, Menegon Yasmine A, Fier Ícaro, Bueno João G R, Dos Santos Leandro V, Gross Jeferson
Institute for Bioenergy Research, Sao Paulo State University, Rio Claro 13500-230, São Paulo, Brazil.
Ph.D. Program in Bioenergy, Sao Paulo State University, Rio Claro 13500-230, São Paulo, Brazil.
ACS Synth Biol. 2022 Nov 18;11(11):3886-3891. doi: 10.1021/acssynbio.2c00348. Epub 2022 Oct 18.
Most CRISPR/Cas9 applications in yeast rely on a plasmid-based expression of Cas9 and its guide RNA (gRNA) containing a 20-nucleotides (nts) spacer tailored to each genomic target. The lengthy assembly of this customized gRNA requires at least 3-5 days for its precloning in , purification, validation, and cotransformation with Cas9 into a yeast strain. Here, we constructed a series of 12 EasyGuide plasmids to simplify CRISPR/Cas9 applications in . The new vectors provide templates for generating PCR fragments that can assemble up to six functional gRNAs directly into yeasts via homologous recombination between the 20-nts spacers. By dispensing precloning in , yeast in vivo gRNA assembly significantly reduces the CRISPR/Cas9 experimental workload. A highly efficient yeast genome editing procedure, involving PCR amplification of gRNAs and donors, followed by their transformation into a Cas9-expressing strain, can be easily accomplished through a quick protocol.
酵母中大多数CRISPR/Cas9应用依赖于基于质粒表达的Cas9及其引导RNA(gRNA),该gRNA包含一个针对每个基因组靶点定制的20个核苷酸(nts)的间隔序列。这种定制gRNA的冗长组装过程,在进行预克隆、纯化、验证以及与Cas9共转化到酵母菌株中时,至少需要3至5天时间。在此,我们构建了一系列12种EasyGuide质粒,以简化酵母中的CRISPR/Cas9应用。这些新载体为生成PCR片段提供模板,通过20个核苷酸间隔序列之间的同源重组,可直接将多达六个功能性gRNA组装到酵母中。通过省去体外预克隆步骤,酵母体内gRNA组装显著减少了CRISPR/Cas9的实验工作量。一种高效的酵母基因组编辑程序,包括gRNA和供体的PCR扩增,然后将它们转化到表达Cas9的菌株中,可通过一个快速方案轻松完成。