University of Queensland Centre for Clinical Research, Herston, QLD, 4029, Australia.
Central Microbiology, Pathology Queensland, Royal Brisbane and Women's Hospital, Herston, QLD, 4029, Australia.
BMC Infect Dis. 2022 Oct 20;22(1):794. doi: 10.1186/s12879-022-07772-x.
Early identification of bloodstream pathogens and their associated antimicrobial resistance may shorten time to optimal therapy in patients with sepsis. The BioFire Blood Culture Identification 2 Panel (BCID2) is a novel multiplex PCR detecting 43 targets directly from positive blood cultures, reducing turnaround times.
We have performed a systematic review and meta-analysis of diagnostic test accuracy studies to assess the BCID2 performance for pathogen identification and resistance markers detection compared to gold standard culture-based methods (including phenotypic and/or genotypic characterization).
Nine studies were identified reporting data to build 2 × 2 tables for each BCID2 target, including 2005 blood cultures. The pooled specificity of the assay was excellent (> 97%) across most subgroups of targets investigated, with a slightly broader confidence interval for S. epidermidis (98.1%, 95% CI 93.1 to 99.5). Pooled sensitivity was also high for the major determinants of bloodstream infection, including Enterobacterales (98.2%, 95% CI 96.3 to 99.1), S. aureus (96.0%, 95% CI 90.4 to 98.4), Streptococcus spp. (96.7%, 95% CI 92.8 to 98.5), P. aeruginosa (92.7%, 95% CI 83.1 to 97.0), E. faecalis (92.3%, 95% CI 83.5 to 96.6), as well as bla (94.9, 95% CI 85.7 to 98.3), carbapenemases (94.9%, 95% CI 83.4 to 98.6) and mecA/C & MREJ (93.9%, 95% CI 83.0 to 98.0). Sensitivity for less common targets was slightly lower, possibly due to their under-representation in the included studies.
BCID2 showed good performance for detecting major determinants of bloodstream infection and could support early antimicrobial treatment, especially for ESBL or carbapenemase-producing Gram-negative bacilli and methicillin-resistant S. aureus.
早期识别血流感染病原体及其相关的抗菌药物耐药性,可能会缩短脓毒症患者接受最佳治疗的时间。BioFire 血液培养鉴定 2 面板(BCID2)是一种新型多重 PCR 检测方法,可直接从阳性血培养物中检测 43 种靶标,从而缩短检测周转时间。
我们对诊断检测准确性研究进行了系统评价和荟萃分析,以评估 BCID2 用于病原体鉴定和耐药标志物检测的性能,与金标准基于培养的方法(包括表型和/或基因型特征)进行比较。
共确定了 9 项研究,报告的数据可用于为每个 BCID2 靶标构建 2×2 表格,包括 2005 份血培养物。该检测方法的特异性在大多数研究的目标亚组中均表现出色(>97%),表皮葡萄球菌的置信区间稍宽(98.1%,95%CI 93.1 至 99.5)。主要血流感染决定因素的汇总敏感性也很高,包括肠杆菌科(98.2%,95%CI 96.3 至 99.1)、金黄色葡萄球菌(96.0%,95%CI 90.4 至 98.4)、链球菌属(96.7%,95%CI 92.8 至 98.5)、铜绿假单胞菌(92.7%,95%CI 83.1 至 97.0)、粪肠球菌(92.3%,95%CI 83.5 至 96.6),以及 bla(94.9%,95%CI 85.7 至 98.3)、碳青霉烯酶(94.9%,95%CI 83.4 至 98.6)和 mecA/C & MREJ(93.9%,95%CI 83.0 至 98.0)。较少见靶标的敏感性略低,这可能是由于纳入研究中代表性不足所致。
BCID2 对检测血流感染的主要决定因素具有良好的性能,可支持早期抗菌治疗,特别是针对产 ESBL 或碳青霉烯酶的革兰氏阴性杆菌和耐甲氧西林金黄色葡萄球菌。