Kohli Pawandeep Singh, Pazhamala Lekha T, Mani Balaji, Thakur Jitendra Kumar, Giri Jitender
National Institute of Plant Genome Research (NIPGR), New Delhi, India.
International Center of Genetic Engineering and Biotechnology, New Delhi, India.
Front Plant Sci. 2022 Oct 4;13:983969. doi: 10.3389/fpls.2022.983969. eCollection 2022.
Root hairs (RH) are a single-cell extension of root epidermal cells. In low phosphorus (LP) availability, RH length and density increase thus expanding the total root surface area for phosphate (Pi) acquisition. However, details on genes involved in RH development and response to LP are missing in an agronomically important leguminous crop, chickpea. To elucidate this response in chickpea, we performed tissue-specific RNA-sequencing and analyzed the transcriptome modulation for RH and root without RH (Root-RH) under LP. Root hair initiation and cellular differentiation genes like RSL TFs and ROPGEFs are upregulated in Root-RH, explaining denser, and ectopic RH in LP. In RH, genes involved in tip growth processes and phytohormonal biosynthesis like cell wall synthesis and loosening (cellulose synthase A catalytic subunit, , , and ), cytoskeleton/vesicle transport, and ethylene biosynthesis are upregulated. Besides RH development, genes involved in LP responses like lipid and/or pectin P remobilization and acid phosphatases are induced in these tissues summarizing a complete molecular response to LP. Further, RH displayed preferential enrichment of processes involved in symbiotic interactions, which provide an additional benefit during LP. In conclusion, RH shows a multi-faceted response that starts with molecular changes for epidermal cell differentiation and RH initiation in Root-RH and later induction of tip growth and various LP responses in elongated RH.
根毛(RH)是根表皮细胞的单细胞延伸。在低磷(LP)条件下,根毛长度和密度增加,从而扩大了获取磷酸盐(Pi)的总根表面积。然而,在具有重要农艺价值的豆科作物鹰嘴豆中,关于参与根毛发育和对低磷反应的基因的详细信息尚不清楚。为了阐明鹰嘴豆的这种反应,我们进行了组织特异性RNA测序,并分析了低磷条件下根毛和无根毛根(Root-RH)的转录组调控。根毛起始和细胞分化基因,如RSL转录因子和ROPGEF,在Root-RH中上调,这解释了低磷条件下根毛更密集和异位根毛的现象。在根毛中,参与顶端生长过程和植物激素生物合成的基因,如细胞壁合成和松弛(纤维素合酶A催化亚基等)、细胞骨架/囊泡运输和乙烯生物合成等基因上调。除了根毛发育外,这些组织中还诱导了参与低磷反应的基因,如脂质和/或果胶的再动员以及酸性磷酸酶,总结了对低磷的完整分子反应。此外,根毛在共生相互作用相关过程中表现出优先富集,这在低磷期间提供了额外的益处。总之,根毛表现出多方面的反应,从Root-RH中表皮细胞分化和根毛起始的分子变化开始,到伸长的根毛中顶端生长和各种低磷反应的诱导。