School of Financial Mathematics and Statistics, Guangdong University of Finance, Guangzhou 510521, P. R. China.
School of Mathematics, Sun Yat-Sen University, Guangzhou 510275, P. R. China.
Phys Chem Chem Phys. 2022 Nov 9;24(43):26600-26608. doi: 10.1039/d2cp03703c.
Gene-expression bimodality, as a potential mechanism generating phenotypic cell diversity, can enhance the survival of cells in a fluctuating environment. Previous studies have shown that intrinsic or extrinsic regulations could induce bimodal gene expressions, but it is unclear whether this bimodality can occur without regulation. Here we develop an interpretable and tractable model, namely a generalized telegraph model (GTM), which considers silent transcription intervals and translational bursting, each being characterized by a general distribution. Using the queuing theory, we derive the analytical expressions of protein distributions, and show that non-exponential inactive times and translational bursting can lead to two peaks of the protein distribution away from the origin, which are different from those occurring in classical telegraph models. We also find that both silent-interval noise and translational burst-size noise can amplify gene-expression noise and induce diverse dynamic expression patterns. Our results not only provide an alternative mechanism of phenotypic switching but also could be used in explaining the bimodal phenomenon in experimental observations.
基因表达双峰性作为一种潜在的产生表型细胞多样性的机制,可以增强细胞在波动环境中的生存能力。先前的研究表明,内在或外在的调节可以诱导双峰基因表达,但目前尚不清楚在没有调节的情况下是否会发生这种双峰性。在这里,我们开发了一种可解释且易于处理的模型,即广义电报模型(GTM),它考虑了沉默转录间隔和翻译爆发,每个间隔和爆发都具有一般分布。利用排队论,我们推导出了蛋白质分布的解析表达式,并表明非指数无活性时间和翻译爆发可以导致蛋白质分布在原点处出现两个远离原点的峰,这与经典电报模型中的情况不同。我们还发现,沉默间隔噪声和翻译爆发大小噪声都可以放大基因表达噪声并诱导多种动态表达模式。我们的研究结果不仅提供了一种表型转换的替代机制,也可以用于解释实验观察中的双峰现象。