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斯坦福 A 型主动脉夹层中的 DNA 甲基化改变。

DNA methylation alternation in Stanford- A acute aortic dissection.

机构信息

Department of Cardiology, Fuwai Hospital, National Center for Cardiovascular Diseases, Chinese Academy of Medical Sciences, Peking Union Medical College, Beijing, China.

Department of Geriatrics and Gerontology, Beijing Friendship Hospital, Capital Medical University, Beijing, China.

出版信息

BMC Cardiovasc Disord. 2022 Oct 29;22(1):455. doi: 10.1186/s12872-022-02882-5.

Abstract

BACKGROUND

Acute aortic dissection (AAD) is a life-threatening cardiovascular disease. Recent studies have shown that DNA methylation may be associated with the pathological mechanism of AAD, but the panorama of DNA methylation needs to be explored.

METHODS

DNA methylation patterns were screened using Infinium Human Methylation 450 K BeadChip in the aortic tissues from 4 patients with Stanford-A AAD and 4 controls. Gene enrichment was analyzed by Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway and gene ontology (GO). DNA methylation levels of candidate genes were determined by pyrosequencing in the replication cohort including 16 patients with AAD and 7 controls. Protein expression level of candidate gene was assessed by Western blot.

RESULTS

A total of 589 differentially methylated positions including 315 hypomethylated and 274 hypermethylated positions were found in AAD group. KEGG analysis demonstrated that differentially methylated position-associated genes were enriched in MAPK signaling pathway, TNF signaling pathway and apoptosis pathway, et al. GO analysis demonstrated that differentially methylated position-associated genes were enriched in protein binding, angiogenesis and heart development et al. The differential DNA methylation in five key genes, including Fas, ANGPT2, DUSP6, FARP1 and CARD6, was authenticated in the independent replication cohort. The protein expression level of the Fas was increased by 1.78 times, indicating the possible role of DNA methylation in regulation of gene expression.

CONCLUSION

DNA methylation was markedly changed in the aortic tissues of Stanford-A AAD and associated with gene dysregulation, involved in AAD progression.

摘要

背景

急性主动脉夹层(AAD)是一种危及生命的心血管疾病。最近的研究表明,DNA 甲基化可能与 AAD 的病理机制有关,但 DNA 甲基化全景仍有待探索。

方法

使用 Infinium Human Methylation 450 K BeadChip 在 4 名 Stanford-A AAD 患者和 4 名对照的主动脉组织中筛选 DNA 甲基化模式。京都基因与基因组百科全书(KEGG)通路和基因本体论(GO)分析基因富集。在包括 16 名 AAD 患者和 7 名对照的复制队列中,通过焦磷酸测序确定候选基因的 DNA 甲基化水平。通过 Western blot 评估候选基因的蛋白表达水平。

结果

在 AAD 组中发现了 589 个差异甲基化位置,包括 315 个低甲基化和 274 个高甲基化位置。KEGG 分析表明,差异甲基化位置相关基因富集在 MAPK 信号通路、TNF 信号通路和细胞凋亡通路等。GO 分析表明,差异甲基化位置相关基因富集在蛋白结合、血管生成和心脏发育等。在独立的复制队列中,五个关键基因(Fas、ANGPT2、DUSP6、FARP1 和 CARD6)的差异 DNA 甲基化得到了验证。Fas 的蛋白表达水平增加了 1.78 倍,表明 DNA 甲基化可能在调节基因表达中发挥作用。

结论

Stanford-A AAD 主动脉组织中的 DNA 甲基化明显改变,并与基因失调相关,参与 AAD 进展。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59b9/9618190/aa630b83ce08/12872_2022_2882_Fig1_HTML.jpg

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