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本文引用的文献

1
The Impact of Pretrained Language Models on Negation and Speculation Detection in Cross-Lingual Medical Text: Comparative Study.预训练语言模型对跨语言医学文本中否定和推测检测的影响:比较研究
JMIR Med Inform. 2020 Dec 3;8(12):e18953. doi: 10.2196/18953.
2
TwiMed: Twitter and PubMed Comparable Corpus of Drugs, Diseases, Symptoms, and Their Relations.TwiMed:Twitter与PubMed关于药物、疾病、症状及其关系的可比语料库。
JMIR Public Health Surveill. 2017 May 3;3(2):e24. doi: 10.2196/publichealth.6396.
3
"When 'Bad' is 'Good'": Identifying Personal Communication and Sentiment in Drug-Related Tweets.当“负面”即“正面”:识别与毒品相关推文中的个人交流和情感倾向
JMIR Public Health Surveill. 2016 Oct 24;2(2):e162. doi: 10.2196/publichealth.6327.
4
Cadec: A corpus of adverse drug event annotations.Cadec:一个药物不良事件注释语料库。
J Biomed Inform. 2015 Jun;55:73-81. doi: 10.1016/j.jbi.2015.03.010. Epub 2015 Mar 27.
5
Pharmacovigilance from social media: mining adverse drug reaction mentions using sequence labeling with word embedding cluster features.社交媒体中的药物警戒:使用带有词嵌入聚类特征的序列标注挖掘药物不良反应提及信息。
J Am Med Inform Assoc. 2015 May;22(3):671-81. doi: 10.1093/jamia/ocu041. Epub 2015 Mar 9.
6
Utilizing social media data for pharmacovigilance: A review.利用社交媒体数据进行药物警戒:综述
J Biomed Inform. 2015 Apr;54:202-12. doi: 10.1016/j.jbi.2015.02.004. Epub 2015 Feb 23.
7
Portable automatic text classification for adverse drug reaction detection via multi-corpus training.通过多语料库训练实现用于药物不良反应检测的便携式自动文本分类
J Biomed Inform. 2015 Feb;53:196-207. doi: 10.1016/j.jbi.2014.11.002. Epub 2014 Nov 8.
8
Extending the NegEx lexicon for multiple languages.扩展适用于多种语言的NegEx词汇表。
Stud Health Technol Inform. 2013;192:677-81.
9
ConText: an algorithm for determining negation, experiencer, and temporal status from clinical reports.语境:一种从临床报告中确定否定、体验者和时间状态的算法。
J Biomed Inform. 2009 Oct;42(5):839-51. doi: 10.1016/j.jbi.2009.05.002. Epub 2009 May 10.
10
The BioScope corpus: biomedical texts annotated for uncertainty, negation and their scopes.生物显微镜语料库:标注了不确定性、否定及其范围的生物医学文本。
BMC Bioinformatics. 2008 Nov 19;9 Suppl 11(Suppl 11):S9. doi: 10.1186/1471-2105-9-S11-S9.

提高社交媒体中药物不良反应抽取的稳健性:基于否定词和推测词的案例研究。

Increasing adverse drug events extraction robustness on social media: Case study on negation and speculation.

机构信息

Department of Mathematics, Computer Science and Physics, University of Udine, Udine 33100, Italy.

Università degli Studi di Napoli Federico II, Napoli 80138, Italy.

出版信息

Exp Biol Med (Maywood). 2022 Nov;247(22):2003-2014. doi: 10.1177/15353702221128577. Epub 2022 Oct 31.

DOI:10.1177/15353702221128577
PMID:36314865
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9791307/
Abstract

In the last decade, an increasing number of users have started reporting adverse drug events (ADEs) on social media platforms, blogs, and health forums. Given the large volume of reports, pharmacovigilance has focused on ways to use natural language processing (NLP) techniques to rapidly examine these large collections of text, detecting mentions of drug-related adverse reactions to trigger medical investigations. However, despite the growing interest in the task and the advances in NLP, the robustness of these models in face of linguistic phenomena such as negations and speculations is an open research question. Negations and speculations are pervasive phenomena in natural language and can severely hamper the ability of an automated system to discriminate between factual and non-factual statements in text. In this article, we take into consideration four state-of-the-art systems for ADE detection on social media texts. We introduce SNAX, a benchmark to test their performance against samples containing negated and speculated ADEs, showing their fragility against these phenomena. We then introduce two possible strategies to increase the robustness of these models, showing that both of them bring significant increases in performance, lowering the number of spurious entities predicted by the models by 60% for negation and 80% for speculations.

摘要

在过去的十年中,越来越多的用户开始在社交媒体平台、博客和健康论坛上报告药物不良事件 (ADE)。鉴于报告数量庞大,药物警戒已专注于使用自然语言处理 (NLP) 技术快速检查这些大量文本的方法,以检测与药物相关的不良反应的提及,从而触发医学调查。然而,尽管人们对这项任务越来越感兴趣,并且在 NLP 方面取得了进展,但这些模型在面对否定和推测等语言现象时的稳健性仍然是一个悬而未决的研究问题。否定和推测是自然语言中普遍存在的现象,它们会严重阻碍自动系统在文本中区分事实和非事实陈述的能力。在本文中,我们考虑了四个用于社交媒体文本中 ADE 检测的最先进系统。我们引入了 SNAX,这是一个基准测试,用于测试它们对包含否定和推测 ADE 的样本的性能,展示了它们对这些现象的脆弱性。然后,我们介绍了两种可能的策略来提高这些模型的稳健性,结果表明这两种策略都显著提高了性能,将模型预测的虚假实体数量分别降低了 60%(用于否定)和 80%(用于推测)。