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: An R Package for Improving Color Accessibility and Organization of Microbiome Data.

作者信息

Dahl Erin M, Neer Emory, Bowie Kate R, Leung Eric T, Karstens Lisa

机构信息

Department of Medical Informatics and Clinical Epidemiology, Division of Bioinformatics and Computational Biomedicine, Oregon Health & Science University, Portland, Oregon, USA.

Knight Cancer Institute, Cancer Early Detection Advanced Research Center, Oregon Health & Science University, Portland, Oregon, USA.

出版信息

Microbiol Resour Announc. 2022 Nov 17;11(11):e0079522. doi: 10.1128/mra.00795-22. Epub 2022 Oct 31.

DOI:10.1128/mra.00795-22
PMID:36314910
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9670991/
Abstract

When creating figures, it is important to consider that individuals with color vision deficiency (CVD) may not perceive all colors. While there are several CVD-friendly color palettes, they are often insufficient for working with microbiome data. Here, we introduce , an R package for creating CVD-accessible microbiome figures.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d98/9670991/2372c1a20850/mra.00795-22-f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d98/9670991/2372c1a20850/mra.00795-22-f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d98/9670991/2372c1a20850/mra.00795-22-f001.jpg

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本文引用的文献

[1]
phyloseq: an R package for reproducible interactive analysis and graphics of microbiome census data.

PLoS One. 2013-4-22

[2]
Colour vision deficiency.

Eye (Lond). 2009-11-20

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