Materials Science Division, Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, California94550-5507, United States.
Global Security Computing Applications Division, Computing Directorate, Lawrence Livermore National Laboratory, Livermore, California94550-5507, United States.
J Chem Inf Model. 2022 Nov 28;62(22):5435-5445. doi: 10.1021/acs.jcim.2c00875. Epub 2022 Oct 31.
Accurately predicting new polymers' properties with machine learning models apriori to synthesis has potential to significantly accelerate new polymers' discovery and development. However, accurately and efficiently capturing polymers' complex, periodic structures in machine learning models remains a grand challenge for the polymer cheminformatics community. Specifically, there has yet to be an ideal solution for the problems of how to capture the periodicity of polymers, as well as how to optimally develop polymer descriptors without requiring human-based feature design. In this work, we tackle these problems by utilizing a periodic polymer graph representation that accounts for polymers' periodicity and coupling it with a message-passing neural network that leverages the power of graph deep learning to automatically learn chemically relevant polymer descriptors. Remarkably, this approach achieves state-of-the-art performance on 8 out of 10 distinct polymer property prediction tasks. These results highlight the advancement in predictive capability that is possible through learning descriptors that are specifically optimized for capturing the unique chemical structure of polymers.
利用机器学习模型在合成前准确预测新聚合物的性质具有显著加速新聚合物发现和开发的潜力。然而,在机器学习模型中准确有效地捕捉聚合物的复杂周期性结构仍然是聚合物化学信息学领域的一个重大挑战。具体来说,如何捕捉聚合物的周期性,以及如何在不依赖人为特征设计的情况下最优地开发聚合物描述符,这些问题仍然没有理想的解决方案。在这项工作中,我们通过利用一种考虑聚合物周期性的周期性聚合物图表示,并结合消息传递神经网络,利用图深度学习的强大功能自动学习与化学相关的聚合物描述符来解决这些问题。值得注意的是,这种方法在 10 个独特的聚合物性质预测任务中的 8 个任务上达到了最先进的性能。这些结果突出了通过学习专门针对捕捉聚合物独特化学结构而优化的描述符来实现预测能力提升的可能性。