Department of Chemical Science and Technology, University of Rome "Tor Vergata", Via della Ricerca Scientifica 1, 00133 Rome, Italy.
Structural Biology and Computational Chemistry, IRBM SpA, Via Pontina Km 30 600, 00 071 Pomezia, Rome, Italy.
Biochim Biophys Acta Biomembr. 2023 Jan 1;1865(1):184080. doi: 10.1016/j.bbamem.2022.184080. Epub 2022 Nov 1.
Of-Pis1 is a potent piscidin antimicrobial peptide (AMP), recently isolated from rock bream (Oplegnathus fasciatus). This rich in histidines and glycines 24-amino acid peptide displays high and broad antimicrobial activity and no significant hemolytic toxicity against human erythrocytes, suggesting low toxicity. To better understand the mechanism of action of Of-Pis1 and its potential selectivity, using NMR and CD spectroscopies, we studied the interaction with eukaryotic and procaryotic membranes and membrane models. Anionic sodium dodecyl sulfate (SDS) and lipopolysaccharide (LPS) micelles were used to mimic procaryotic membranes, while zwitterionic dodecyl phosphocholine (DPC) was used as eukaryotic membrane surrogate. In an aqueous environment, Of-Pis1 adopts a flexible random coil conformation. In DPC and SDS instead, the N-terminal region of Of-Pis1 forms an amphipathic α-helix with the non-polar face in close contact with the micelles. Slower solvent exchange and higher pKs of the histidine residues in SDS than in DPC suggest that Of-Pis1 interacts more tightly with SDS. Of-Pis1 also binds tightly and structurally perturbs LPS micelles. Of-Pis1 interacts with both Escherichia coli and mammalian cell membranes, but only in the presence of Escherichia coli membranes it populates the helical conformation. Furthermore, ligand-based NMR experiments support a tighter and more specific interaction with bacterial than with eukaryotic membranes. Overall, these data clearly show the selective interaction of this broadly active AMP with bacterial over eukaryotic membranes. The conformational information is discussed in terms of Of-Pis1 amino acid sequence and composition to provide insights useful to design more potent and selective AMPs.
Of-Pis1 是一种有效的鱼抗菌肽 (AMP),最近从石斑鱼 (Oplegnathus fasciatus) 中分离出来。这种富含组氨酸和甘氨酸的 24 个氨基酸肽具有高且广谱的抗菌活性,对人红细胞无明显溶血毒性,提示毒性低。为了更好地了解 Of-Pis1 的作用机制及其潜在的选择性,我们使用 NMR 和 CD 光谱学研究了它与真核和原核膜以及膜模型的相互作用。阴离子十二烷基硫酸钠 (SDS) 和脂多糖 (LPS) 胶束被用来模拟原核膜,而两性离子十二烷基磷酸胆碱 (DPC) 则被用来模拟真核膜。在水相环境中,Of-Pis1 采用灵活的无规卷曲构象。在 DPC 和 SDS 中,Of-Pis1 的 N 端区域形成具有非极性面与胶束紧密接触的两亲性α-螺旋。SDS 中组氨酸残基的溶剂交换速度较慢且 pKs 较高,表明 Of-Pis1 与 SDS 的相互作用更紧密。Of-Pis1 还与 LPS 胶束紧密结合并使其结构发生扰动。Of-Pis1 与大肠杆菌和哺乳动物细胞膜相互作用,但只有在大肠杆菌膜存在的情况下,它才会形成螺旋构象。此外,基于配体的 NMR 实验支持与细菌膜的结合更紧密且更具特异性,而不是与真核膜的结合。总的来说,这些数据清楚地表明,这种广泛活性的 AMP 与细菌膜而非真核膜具有选择性相互作用。构象信息是根据 Of-Pis1 的氨基酸序列和组成进行讨论的,这为设计更有效和更具选择性的 AMP 提供了有用的见解。