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Artemis 自身调节 C 末端结构域的部分缺失及其对其核酸酶活性的影响。

Partial deletions of the autoregulatory C-terminal domain of Artemis and their effect on its nuclease activity.

机构信息

Departments of Pathology, Biochemistry & Molecular Biology, and Molecular Microbiology & Immunology, and the Section of Molecular & Computational Biology in the Department of Biological Sciences, Norris Comprehensive Cancer Center, University of Southern California Keck School of Medicine, Los Angeles, CA 90033, USA.

Department of Chemistry, Drug Discovery Division, Southern Research Institute Birmingham, AL, USA.

出版信息

DNA Repair (Amst). 2022 Dec;120:103422. doi: 10.1016/j.dnarep.2022.103422. Epub 2022 Oct 28.

DOI:10.1016/j.dnarep.2022.103422
PMID:36332285
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9691611/
Abstract

Artemis is a 692 aa nuclease that is essential for opening hairpins during vertebrate V(D)J recombination. Artemis is also important in the DNA repair of double-strand breaks via the nonhomologous DNA end joining (NHEJ) pathway. Therefore, absence of Artemis has been shown to result not only in the blockage of lymphocyte development in vertebrates, but also sensitivity of organisms and cells to double-strand break-inducing events that arise in the course of normal metabolism. Nonhomologous DNA end joining (NHEJ) is the major pathway for the repair of double-strand DNA breaks in most vertebrate cells during most of the cell cycle, including in resting cells. Artemis is the primary nuclease for resection of damaged DNA at double-strand breaks. Artemis alone is inactive as an endonuclease, though it has 5'-exonuclease activity. The endonuclease activity requires physical interaction with DNA-PKcs and subsequent activation steps. Truncation of the C-terminal half of Artemis permits Artemis to be active, even without DNA-PKcs. Here we create a systematic set of deletions from the Artemis C-terminus to determine the minimal extent of C-terminal deletion for Artemis to function in a DNA-PKcs-independent manner. We discuss these data in the context of recent structural studies. The results will be useful in future studies to determine the full range of functions of the C-terminal region of Artemis in the regulation of its endonuclease activity.

摘要

Artemis 是一种 692 个氨基酸的核酸酶,对于脊椎动物 V(D)J 重组过程中发夹结构的打开至关重要。Artemis 对于通过非同源末端连接(NHEJ)途径修复双链断裂也很重要。因此,Artemis 的缺失不仅导致脊椎动物淋巴细胞发育受阻,而且还导致生物体和细胞对正常代谢过程中产生的双链断裂诱导事件敏感。非同源末端连接(NHEJ)是大多数脊椎动物细胞在大多数细胞周期中修复双链 DNA 断裂的主要途径,包括静止细胞。Artemis 是双链断裂处受损 DNA 切除的主要核酸酶。Artemis 本身作为内切核酸酶是无活性的,尽管它具有 5'-核酸外切酶活性。内切核酸酶活性需要与 DNA-PKcs 的物理相互作用以及随后的激活步骤。Artemis C 端的截断允许 Artemis 即使没有 DNA-PKcs 也能发挥活性。在这里,我们从 Artemis C 端创建了一套系统的缺失,以确定 Artemis 在 DNA-PKcs 独立方式下发挥作用所需的 C 端缺失的最小程度。我们将这些数据置于最近的结构研究背景下进行讨论。这些结果将有助于未来的研究,以确定 Artemis C 端在调节其内切核酸酶活性方面的完整功能范围。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ef/9691611/252acdd034b6/nihms-1848975-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ef/9691611/73a718f93238/nihms-1848975-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ef/9691611/1fde175e3190/nihms-1848975-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ef/9691611/32d9c4313ad3/nihms-1848975-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ef/9691611/902ff1137083/nihms-1848975-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ef/9691611/c831a7591712/nihms-1848975-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ef/9691611/252acdd034b6/nihms-1848975-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ef/9691611/73a718f93238/nihms-1848975-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ef/9691611/1fde175e3190/nihms-1848975-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ef/9691611/32d9c4313ad3/nihms-1848975-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ef/9691611/902ff1137083/nihms-1848975-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ef/9691611/c831a7591712/nihms-1848975-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56ef/9691611/252acdd034b6/nihms-1848975-f0006.jpg

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2
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Adv Exp Med Biol. 2023;1414:1-26. doi: 10.1007/5584_2022_724.
3
Physical ARTEMIS:DNA-PKcs interaction is necessary for V(D)J recombination.物理 ARTEMIS:DNA-PKcs 相互作用对于 V(D)J 重组是必要的。
Nucleic Acids Res. 2022 Feb 28;50(4):2096-2110. doi: 10.1093/nar/gkac071.
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Autophosphorylation transforms DNA-PK from protecting to processing DNA ends.自动磷酸化将 DNA-PK 从保护 DNA 末端转变为处理 DNA 末端。
Mol Cell. 2022 Jan 6;82(1):177-189.e4. doi: 10.1016/j.molcel.2021.11.025. Epub 2021 Dec 21.
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Structural and mechanistic insights into the Artemis endonuclease and strategies for its inhibition.Artemis 内切酶的结构与机制研究进展及其抑制策略。
Nucleic Acids Res. 2021 Sep 20;49(16):9310-9326. doi: 10.1093/nar/gkab693.
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Highly accurate protein structure prediction with AlphaFold.利用 AlphaFold 进行高精度蛋白质结构预测。
Nature. 2021 Aug;596(7873):583-589. doi: 10.1038/s41586-021-03819-2. Epub 2021 Jul 15.
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The molecular basis and disease relevance of non-homologous DNA end joining.非同源 DNA 末端连接的分子基础和疾病相关性。
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