Institut de Ciències del Mar, Consejo Superior de Investigaciones Científicas (ICM-CSIC), 08003, Barcelona, Spain.
PhD Program in Genetics, Autonomous University of Barcelona, 08193, Bellaterra, Spain.
Sci Rep. 2022 Nov 4;12(1):18722. doi: 10.1038/s41598-022-21864-3.
In the last decade, a plethora of microRNAs (miRNAs) has been reported in a wide variety of physiological processes, including reproduction, in many aquatic organisms. However, miRNAome alterations occurred by environmental cues due to water temperature increment have not yet been elucidated. With the aim to identify epigenetic regulations mediated by miRNAs in the gonads in a climate change scenario, the animal model zebrafish (Danio rerio) were subjected to high temperatures during sex differentiation, a treatment that results in male-skewed sex ratios in the adulthood. Once the fish reached adulthood, gonads were sequenced by high-throughput technologies and a total of 23 and 1 differentially expressed miRNAs in ovaries and testes, respectively, were identified two months after the heat treatment. Most of these heat-recorder miRNAs were involved in human sex-related cancer and about 400 predicted-target genes were obtained, some with reproduction-related functions. Their synteny in the zebrafish genome was, for more than half of the predicted target genes, in the chromosomes 7, 2, 4, 3 and 11 in the ovaries, chromosome 4 being the place where the sex-associated-region (sar) is localized in wild zebrafish. Further, spatial localization in the gonads of two selected heat-recorder miRNAs (miR-122-5p and miR-146-5p) showed exclusive expression in the ovarian germ cells. The present study expands the catalog of sex-specific miRNAs and deciphers, for the first time, thermosensitive miRNAs in the zebrafish gonads that might be used as potential epimarkers to predict environmental past events.
在过去的十年中,大量的 microRNAs(miRNAs)在许多水生生物的广泛生理过程中被报道,包括生殖。然而,由于水温升高而导致的环境线索引起的 miRNAome 变化尚未阐明。为了在气候变化情景中识别由 miRNAs 介导的生殖腺中的表观遗传调控,使用鱼类模型斑马鱼(Danio rerio)在性别分化期间进行高温处理,该处理导致成年后雄性偏斜的性别比例。一旦鱼类成年,通过高通量技术对性腺进行测序,在热处理两个月后,分别在卵巢和睾丸中鉴定出 23 个和 1 个差异表达的 miRNAs。这些热记录 miRNA 中的大多数参与了人类与性别相关的癌症,并且获得了大约 400 个预测靶基因,其中一些具有与生殖相关的功能。它们在斑马鱼基因组中的基因座,对于超过一半的预测靶基因,在卵巢中的染色体 7、2、4、3 和 11 上,染色体 4 是野生型斑马鱼中性别相关区域(sar)定位的地方。此外,在两个选定的热记录 miRNA(miR-122-5p 和 miR-146-5p)在性腺中的空间定位显示在卵巢生殖细胞中特异性表达。本研究扩展了性别特异性 miRNAs 的目录,并首次阐明了斑马鱼生殖腺中的热敏 miRNAs,它们可能用作预测环境过去事件的潜在 epimarkers。