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膀胱癌研究中的单细胞测序技术:应用与挑战

Single-cell sequencing technologies in bladder cancer research: Applications and challenges.

作者信息

Lyu Tianqi, Lin Yuanbin, Wu Kerong, Cao Zhanglei, Zhang Qian, Zheng Jianping

机构信息

Cixi Institute of Biomedical Engineering, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Science (CAS), Ningbo, China.

Department of Urology, Ningbo First Hospital, School of Medicine Ningbo University, Zhejiang University Ningbo Hospital, Ningbo, China.

出版信息

Front Genet. 2022 Oct 19;13:1027909. doi: 10.3389/fgene.2022.1027909. eCollection 2022.

DOI:10.3389/fgene.2022.1027909
PMID:36338973
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9627177/
Abstract

Bladder cancer is among the most common malignant tumors with highly heterogeneous molecular characteristics. Despite advancements of the available therapeutic options, several bladder cancer patients exhibit unsatisfactory clinical outcomes. The lack of specific biomarkers for effective targeted therapy or immunotherapy remains a major obstacle in treating bladder cancer. The rapid development of single-cell techniques is transforming our understanding of the intra-tumoral heterogeneity, thereby providing us with a powerful high-throughput sequencing tool that can reveal tumorigenesis, progression, and invasion in bladder tumors. In this review, we summarise and discuss how single-cell sequencing technologies have been applied in bladder cancer research, to advance our collective knowledge on the heterogeneity of bladder tumor cells, as well as to provide new insights into the complex ecosystem of the tumor microenvironment. The application of single-cell approaches also uncovers the therapeutic resistance mechanism in bladder cancer and facilitates the detection of urinary-exfoliated tumor cells. Moreover, benefiting from the powerful technical advantages of single-cell techniques, several key therapeutic targets and prognostic models of bladder cancer have been identified. It is hoped that this paper can provide novel insights into the precision medicine of bladder cancer.

摘要

膀胱癌是最常见的恶性肿瘤之一,具有高度异质性的分子特征。尽管现有治疗方案取得了进展,但仍有部分膀胱癌患者的临床疗效不尽人意。缺乏用于有效靶向治疗或免疫治疗的特异性生物标志物仍然是治疗膀胱癌的主要障碍。单细胞技术的迅速发展正在改变我们对肿瘤内异质性的理解,从而为我们提供了一种强大的高通量测序工具,能够揭示膀胱肿瘤的发生、发展和侵袭过程。在这篇综述中,我们总结并讨论了单细胞测序技术如何应用于膀胱癌研究,以增进我们对膀胱肿瘤细胞异质性的共同认识,并为肿瘤微环境的复杂生态系统提供新的见解。单细胞方法的应用还揭示了膀胱癌的治疗耐药机制,并有助于检测尿液脱落的肿瘤细胞。此外,受益于单细胞技术强大的技术优势,已经确定了几个膀胱癌的关键治疗靶点和预后模型。希望本文能为膀胱癌的精准医学提供新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7efc/9627177/b427f2cce299/fgene-13-1027909-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7efc/9627177/4bb701362c26/fgene-13-1027909-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7efc/9627177/1438c8c8c5a1/fgene-13-1027909-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7efc/9627177/b427f2cce299/fgene-13-1027909-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7efc/9627177/4bb701362c26/fgene-13-1027909-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7efc/9627177/1438c8c8c5a1/fgene-13-1027909-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7efc/9627177/b427f2cce299/fgene-13-1027909-g003.jpg

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本文引用的文献

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2
Application and prospects of single cell sequencing in tumors.单细胞测序在肿瘤中的应用及前景
Biomark Res. 2021 Dec 11;9(1):88. doi: 10.1186/s40364-021-00336-2.
3
Single-Cell Proteomic Analysis Dissects the Complexity of Tumor Microenvironment in Muscle Invasive Bladder Cancer.单细胞蛋白质组学分析揭示肌肉浸润性膀胱癌肿瘤微环境的复杂性
用于制造高孔隙率膜以捕获循环肿瘤细胞和脱落肿瘤细胞的、带有简单光刻胶掩膜的聚对二甲苯-C的反应离子蚀刻
Micromachines (Basel). 2024 Apr 13;15(4):521. doi: 10.3390/mi15040521.
4
Advances in preclinical assessment of therapeutic targets for bladder cancer precision medicine.膀胱癌精准医学治疗靶点的临床前评估进展。
Curr Opin Urol. 2024 Jul 1;34(4):251-257. doi: 10.1097/MOU.0000000000001177. Epub 2024 Apr 10.
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An omics approach to delineating the molecular mechanisms that underlie the biological effects of physical plasma.一种用于阐明物理等离子体生物学效应背后分子机制的组学方法。
Biophys Rev (Melville). 2023 Mar 28;4(1):011312. doi: 10.1063/5.0089831. eCollection 2023 Mar.
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Applications of single‑cell omics and spatial transcriptomics technologies in gastric cancer (Review).单细胞组学和空间转录组学技术在胃癌中的应用(综述)
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Recreating heterogeneity of bladder cancer microenvironment to study its recurrences and progression.重建膀胱癌微环境的异质性以研究其复发和进展。
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