• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

转录组分析揭示了与玉米抗立枯丝核菌相关的潜在基因。

Transcriptome analysis reveals genes potentially related to maize resistance to Rhizoctonia solani.

机构信息

State Key Laboratory of Crop Biology, Shandong Agricultural University, Tai an, 271018, China.

State Key Laboratory of Crop Biology, Shandong Agricultural University, Tai an, 271018, China.

出版信息

Plant Physiol Biochem. 2022 Dec 15;193:78-89. doi: 10.1016/j.plaphy.2022.10.029. Epub 2022 Nov 2.

DOI:10.1016/j.plaphy.2022.10.029
PMID:36343463
Abstract

Banded leaf and sheath blight (BLSB) is a devasting disease caused by the necrotrophic fungus Rhizoctonia solani that affects maize (Zea mays L.) fields worldwide, especially in China and Southeast Asia. Understanding how maize plants respond to R. solani infection is a key step towards controlling the spread of this fungal pathogen. In this study, we determined the transcriptome of maize plants infected by a low-virulence strain (LVS) and a high-virulence strain (HVS) of R. solani for 3 and 5 days by transcriptome deep-sequencing (RNA-seq). We identified 3,015 (for LVS infection) and 1,628 (for HVS infection) differentially expressed genes (DEGs). We confirmed the expression profiles of 10 randomly selected DEGs by quantitative reverse transcription PCR. We also performed a Gene Ontology (GO) enrichment analysis to establish which biological processes are associated with these DEGs, which revealed the enrichment of defense-related GO terms in LVS- and HVS-regulated genes. We selected 388 DEGs upregulated upon fungal infection as possible candidate genes. Among them, the overexpression of ZmNAC41 (encoding NAC transcription factor 41) or ZmBAK1 (encoding BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1) in rice enhanced resistance to R. solani. In addition, overexpressing ZmBAK1 in rice also increased plant height, plant weight, thousand-grain weight, and grain length. The identification of 388 potential key maize genes related to resistance to R. solani provides significant insights into improving BLSB resistance.

摘要

带叶鞘枯斑病(Banded leaf and sheath blight,BLSB)是一种由坏死型真菌立枯丝核菌引起的毁灭性病害,影响全球范围内的玉米(Zea mays L.)田,尤其在中国和东南亚地区。了解玉米植株如何应对立枯丝核菌的感染是控制这种真菌病原体传播的关键步骤。在这项研究中,我们通过转录组深度测序(RNA-seq)确定了感染低毒力菌株(LVS)和高毒力菌株(HVS)立枯丝核菌的玉米植株在 3 天和 5 天的转录组。我们鉴定了 3015 个(用于 LVS 感染)和 1628 个(用于 HVS 感染)差异表达基因(DEGs)。我们通过定量逆转录 PCR 验证了 10 个随机选择的 DEGs 的表达谱。我们还进行了基因本体论(GO)富集分析,以确定哪些生物过程与这些 DEGs 相关,这揭示了防御相关 GO 术语在 LVS 和 HVS 调控基因中的富集。我们选择了 388 个在真菌感染后上调的 DEGs 作为可能的候选基因。其中,ZmNAC41(编码 NAC 转录因子 41)或 ZmBAK1(编码 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1)在水稻中的过表达增强了对立枯丝核菌的抗性。此外,在水稻中过表达 ZmBAK1 还增加了株高、植株重量、千粒重和粒长。鉴定出的 388 个与玉米对立枯丝核菌抗性相关的潜在关键基因,为提高 BLSB 抗性提供了重要的见解。

相似文献

1
Transcriptome analysis reveals genes potentially related to maize resistance to Rhizoctonia solani.转录组分析揭示了与玉米抗立枯丝核菌相关的潜在基因。
Plant Physiol Biochem. 2022 Dec 15;193:78-89. doi: 10.1016/j.plaphy.2022.10.029. Epub 2022 Nov 2.
2
Identification of virulence associated milRNAs and their bidirectional targets in Rhizoctonia solani and maize during infection.鉴定 Rhizoctonia solani 和玉米在感染过程中与毒力相关的 milRNAs 及其双向靶标。
BMC Plant Biol. 2021 Mar 26;21(1):155. doi: 10.1186/s12870-021-02930-w.
3
Transcriptome analysis reveals molecular mechanisms of sclerotial development in the rice sheath blight pathogen Rhizoctonia solani AG1-IA.转录组分析揭示了稻纹枯病菌 AG1-IA 菌核发育的分子机制。
Funct Integr Genomics. 2019 Sep;19(5):743-758. doi: 10.1007/s10142-019-00677-0. Epub 2019 May 3.
4
Gene expression analysis of resistant and susceptible rice cultivars to sheath blight after inoculation with Rhizoctonia solani.接种立枯丝核菌后抗纹枯病和感纹枯病水稻品种的基因表达分析
BMC Genomics. 2022 Apr 7;23(1):278. doi: 10.1186/s12864-022-08524-6.
5
Pectin induced transcriptome of a Rhizoctonia solani strain causing sheath blight disease in rice reveals insights on key genes and RNAi machinery for development of pathogen derived resistance.果胶诱导引起水稻纹枯病的立枯丝核菌菌株的转录组研究揭示了关键基因和 RNAi 机制,为病原菌衍生抗性的发展提供了思路。
Plant Mol Biol. 2019 May;100(1-2):59-71. doi: 10.1007/s11103-019-00843-9. Epub 2019 Feb 22.
6
Functional analysis of the GRMZM2G174449 promoter to identify Rhizoctonia solani-inducible cis-elements in maize.利用玉米 GRMZM2G174449 启动子的功能分析鉴定其对罗耳氏菌属诱导的顺式作用元件。
BMC Plant Biol. 2017 Dec 4;17(1):233. doi: 10.1186/s12870-017-1181-5.
7
Comparison of leaf transcriptome in response to Rhizoctonia solani infection between resistant and susceptible rice cultivars.比较抗感水稻品种受立枯丝核菌侵染后的叶片转录组。
BMC Genomics. 2020 Mar 19;21(1):245. doi: 10.1186/s12864-020-6645-6.
8
Time-course transcriptome analysis identifies rewiring patterns of transcriptional regulatory networks in rice under Rhizoctonia solani infection.时间进程转录组分析鉴定了水稻受立枯丝核菌侵染时转录调控网络的重布线模式。
Gene. 2022 Jun 20;828:146468. doi: 10.1016/j.gene.2022.146468. Epub 2022 Apr 4.
9
Salicylic acid-dependent immunity contributes to resistance against Rhizoctonia solani, a necrotrophic fungal agent of sheath blight, in rice and Brachypodium distachyon.水杨酸依赖的免疫有助于水稻和短柄草抵抗丝核菌,丝核菌是一种引起叶鞘枯病的坏死性真菌病原体。
New Phytol. 2018 Jan;217(2):771-783. doi: 10.1111/nph.14849. Epub 2017 Oct 19.
10
Suppressing chlorophyll degradation by silencing OsNYC3 improves rice resistance to Rhizoctonia solani, the causal agent of sheath blight.通过沉默 OsNYC3 抑制叶绿素降解可提高水稻对 Rhizoctonia solani 的抗性,后者是纹枯病的致病因子。
Plant Biotechnol J. 2022 Feb;20(2):335-349. doi: 10.1111/pbi.13715. Epub 2021 Oct 20.

引用本文的文献

1
Integrated Transcriptomic and Metabolomic Analysis of and Responses to Wilt Infection.对青枯病感染的转录组和代谢组综合分析及响应
Int J Mol Sci. 2024 Dec 24;26(1):28. doi: 10.3390/ijms26010028.
2
Global transcriptome analysis reveals resistance genes in the early response of common bean (Phaseolus vulgaris L.) to Colletotrichum lindemuthianum.全球转录组分析揭示了普通菜豆(Phaseolus vulgaris L.)对炭疽病菌(Colletotrichum lindemuthianum)早期反应中的抗性基因。
BMC Genomics. 2024 Jun 10;25(1):579. doi: 10.1186/s12864-024-10497-7.
3
Comparative transcriptomic profiling of the two-stage response of rice to Xanthomonas oryzae pv. oryzicola interaction with two different pathogenic strains.
比较转录组分析水稻对稻黄单胞菌 pv.oryzicola 与两种不同致病菌株互作的两阶段反应。
BMC Plant Biol. 2024 Apr 29;24(1):347. doi: 10.1186/s12870-024-05060-1.
4
Genome-wide identification of ZmMYC2 binding sites and target genes in maize.玉米中ZmMYC2结合位点和靶基因的全基因组鉴定
BMC Genomics. 2024 Apr 23;25(1):397. doi: 10.1186/s12864-024-10297-z.
5
Oschib1 gene encoding a GH18 chitinase confers resistance against sheath blight disease of rice caused by Rhizoctonia solani AG1-IA.编码 GH18 几丁质酶的 Oschib1 基因赋予水稻对由 Rhizoctonia solani AG1-IA 引起的纹枯病的抗性。
Plant Mol Biol. 2024 Apr 16;114(3):41. doi: 10.1007/s11103-024-01442-z.
6
Utilizing Two Populations Derived from Tropical Maize for Genome-Wide Association Analysis of Banded Leaf and Sheath Blight Resistance.利用源自热带玉米的两个群体进行纹枯病抗性的全基因组关联分析。
Plants (Basel). 2024 Feb 4;13(3):456. doi: 10.3390/plants13030456.
7
Plant biomarkers as early detection tools in stress management in food crops: a review.植物生物标志物作为粮食作物胁迫管理中的早期检测工具:综述
Planta. 2024 Feb 5;259(3):60. doi: 10.1007/s00425-024-04333-1.
8
The F-box protein ZmFBL41 negatively regulates disease resistance to Rhizoctonia solani by degrading the abscisic acid synthase ZmNCED6 in maize.玉米 F-box 蛋白 ZmFBL41 通过降解脱落酸合成酶 ZmNCED6 负调控对丝核菌的抗病性。
Plant Cell Rep. 2024 Feb 1;43(2):48. doi: 10.1007/s00299-023-03132-4.
9
Identification and characterization of pathogenicity-related genes of AG3 during tobacco infection.烟草感染过程中AG3致病相关基因的鉴定与表征
Front Plant Sci. 2023 Jan 17;13:1116506. doi: 10.3389/fpls.2022.1116506. eCollection 2022.