• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

用于预测结肠腺癌预后的坏死性凋亡相关基因特征的开发。

Development of necroptosis-related gene signature to predict the prognosis of colon adenocarcinoma.

作者信息

Li Miaomiao, Zhang Tianyang, Chen Wei

机构信息

School of Life Sciences, North China University of Science and Technology, Tangshan, China.

Innovative Institute of Chinese Medicine and Pharmacy, Chengdu University of Traditional Chinese Medicine, Chengdu, China.

出版信息

Front Genet. 2022 Oct 24;13:1051800. doi: 10.3389/fgene.2022.1051800. eCollection 2022.

DOI:10.3389/fgene.2022.1051800
PMID:36353119
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9639779/
Abstract

Colon adenocarcinoma (COAD) is a common malignancy and has a high mortality rate. However, the current tumor node metastasis (TNM) staging system is inadequate for prognostic assessment of COAD patients. Therefore, there is an urgent need to identify reliable biomarkers for the prognosis COAD patients. The aberrant expression of necroptosis-related genes (NRGs) is reported to be associated with tumorigenesis and metastasis. In the present work, we compared the expression profiles of NRGs between COAD patients and normal individuals. Based on seven differentially expressed NRGs, a risk score was defined to predict the prognosis of COAD patients. The validation results from both training and independent external cohorts demonstrated that the risk score is able to distinguish the high and low risk COAD patients with higher accuracies, and is independent of the other clinical factors. To facilitate its clinical use, by integrating the proposed risk score, a nomogram was built to predict the risk of individual COAD patients. The C-index of the nomogram is 0.75, indicating the reliability of the nomogram in predicting survival rates. Furthermore, two candidate drugs, namely dapsone and xanthohumol, were screed out and validated by molecular docking, which hold the potential for the treatment of COAD. These results will provide novel clues for the diagnosis and treatment of COAD.

摘要

结肠腺癌(COAD)是一种常见的恶性肿瘤,死亡率很高。然而,目前的肿瘤淋巴结转移(TNM)分期系统不足以对COAD患者进行预后评估。因此,迫切需要为COAD患者的预后鉴定可靠的生物标志物。据报道,坏死性凋亡相关基因(NRGs)的异常表达与肿瘤发生和转移有关。在本研究中,我们比较了COAD患者和正常个体之间NRGs的表达谱。基于七个差异表达的NRGs,定义了一个风险评分来预测COAD患者的预后。来自训练队列和独立外部队列的验证结果表明,该风险评分能够以更高的准确性区分高风险和低风险的COAD患者,并且独立于其他临床因素。为了便于其临床应用,通过整合所提出的风险评分,构建了一个列线图来预测个体COAD患者的风险。列线图的C指数为0.75,表明列线图在预测生存率方面的可靠性。此外,筛选出两种候选药物,即氨苯砜和黄腐酚,并通过分子对接进行了验证,它们具有治疗COAD的潜力。这些结果将为COAD的诊断和治疗提供新的线索。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59a6/9639779/fc8b8e50b185/fgene-13-1051800-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59a6/9639779/33bb2b211172/fgene-13-1051800-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59a6/9639779/2737b7425284/fgene-13-1051800-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59a6/9639779/ae509cfc280d/fgene-13-1051800-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59a6/9639779/bc3ee0d70a9b/fgene-13-1051800-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59a6/9639779/d2234096e3f8/fgene-13-1051800-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59a6/9639779/eaffe381d21e/fgene-13-1051800-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59a6/9639779/cad2cb8c0345/fgene-13-1051800-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59a6/9639779/fc8b8e50b185/fgene-13-1051800-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59a6/9639779/33bb2b211172/fgene-13-1051800-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59a6/9639779/2737b7425284/fgene-13-1051800-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59a6/9639779/ae509cfc280d/fgene-13-1051800-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59a6/9639779/bc3ee0d70a9b/fgene-13-1051800-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59a6/9639779/d2234096e3f8/fgene-13-1051800-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59a6/9639779/eaffe381d21e/fgene-13-1051800-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59a6/9639779/cad2cb8c0345/fgene-13-1051800-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59a6/9639779/fc8b8e50b185/fgene-13-1051800-g008.jpg

相似文献

1
Development of necroptosis-related gene signature to predict the prognosis of colon adenocarcinoma.用于预测结肠腺癌预后的坏死性凋亡相关基因特征的开发。
Front Genet. 2022 Oct 24;13:1051800. doi: 10.3389/fgene.2022.1051800. eCollection 2022.
2
Identification of necroptosis-related genes for predicting prognosis and exploring immune infiltration landscape in colon adenocarcinoma.鉴定用于预测结肠癌预后和探索免疫浸润格局的坏死性凋亡相关基因。
Front Oncol. 2022 Nov 24;12:941156. doi: 10.3389/fonc.2022.941156. eCollection 2022.
3
Identification and validation of a necroptosis-related gene prognostic signature for colon adenocarcinoma.结肠癌坏死性凋亡相关基因预后特征的鉴定与验证
Transl Cancer Res. 2023 Sep 30;12(9):2239-2255. doi: 10.21037/tcr-23-494. Epub 2023 Aug 31.
4
An Intratumor Heterogeneity-Related Signature for Predicting Prognosis, Immune Landscape, and Chemotherapy Response in Colon Adenocarcinoma.一种用于预测结肠腺癌预后、免疫微环境和化疗反应的肿瘤内异质性相关特征
Front Med (Lausanne). 2022 Jul 7;9:925661. doi: 10.3389/fmed.2022.925661. eCollection 2022.
5
Identification of colon adenocarcinoma necroptosis subtypes and tumor antigens for the development of mRNA vaccines.鉴定用于开发mRNA疫苗的结肠腺癌坏死性凋亡亚型和肿瘤抗原。
Heliyon. 2024 Jun 7;10(12):e32531. doi: 10.1016/j.heliyon.2024.e32531. eCollection 2024 Jun 30.
6
Identification of Transcription Factor-Related Gene Signature and Risk Score Model for Colon Adenocarcinoma.结肠癌转录因子相关基因特征及风险评分模型的鉴定
Front Genet. 2021 Sep 17;12:709133. doi: 10.3389/fgene.2021.709133. eCollection 2021.
7
Identification of a glycolysis- and lactate-related gene signature for predicting prognosis, immune microenvironment, and drug candidates in colon adenocarcinoma.鉴定用于预测结肠腺癌预后、免疫微环境和候选药物的糖酵解和乳酸相关基因特征。
Front Cell Dev Biol. 2022 Aug 23;10:971992. doi: 10.3389/fcell.2022.971992. eCollection 2022.
8
Development of a novel necroptosis-associated miRNA risk signature to evaluate the prognosis of colon cancer patients.一种用于评估结肠癌患者预后的新型坏死性凋亡相关微小RNA风险特征的开发。
Ann Transl Med. 2021 Dec;9(24):1800. doi: 10.21037/atm-21-6576.
9
A novel signature model based on mitochondrial-related genes for predicting survival of colon adenocarcinoma.基于线粒体相关基因的新型签名模型用于预测结肠腺癌的生存。
BMC Med Inform Decis Mak. 2022 Oct 22;22(1):277. doi: 10.1186/s12911-022-02020-3.
10
A novel enterocyte-related 4-gene signature for predicting prognosis in colon adenocarcinoma.一种新型肠相关 4 基因标志物用于预测结肠腺癌的预后。
Front Immunol. 2022 Dec 2;13:1052182. doi: 10.3389/fimmu.2022.1052182. eCollection 2022.

本文引用的文献

1
Construction and Validation of a Necroptosis-Related Gene Signature for Predicting Prognosis and Tumor Microenvironment of Pancreatic Cancer.构建并验证一个与细胞坏死性凋亡相关的基因签名,用于预测胰腺癌的预后和肿瘤微环境。
Dis Markers. 2022 Jun 14;2022:9737587. doi: 10.1155/2022/9737587. eCollection 2022.
2
Comprehensive Profiling Reveals Prognostic and Immunogenic Characteristics of Necroptosis in Soft Tissue Sarcomas.全面分析揭示了软组织肉瘤中细胞坏死性凋亡的预后和免疫原性特征。
Front Immunol. 2022 May 18;13:877815. doi: 10.3389/fimmu.2022.877815. eCollection 2022.
3
MDACT: A New Principle of Adjunctive Cancer Treatment Using Combinations of Multiple Repurposed Drugs, with an Example Regimen.
MDACT:一种使用多种重新利用药物组合进行辅助癌症治疗的新原则及示例方案。
Cancers (Basel). 2022 May 23;14(10):2563. doi: 10.3390/cancers14102563.
4
Comprehensive Analysis of Necroptosis-Related Long Noncoding RNA Immune Infiltration and Prediction of Prognosis in Patients With Colon Cancer.结肠癌患者坏死性凋亡相关长链非编码RNA免疫浸润的综合分析及预后预测
Front Mol Biosci. 2022 Feb 14;9:811269. doi: 10.3389/fmolb.2022.811269. eCollection 2022.
5
Anti-Tumor Role of CAMK2B in Remodeling the Stromal Microenvironment and Inhibiting Proliferation in Papillary Renal Cell Carcinoma.CAMK2B在重塑间质微环境及抑制乳头状肾细胞癌增殖中的抗肿瘤作用
Front Oncol. 2022 Jan 21;12:740051. doi: 10.3389/fonc.2022.740051. eCollection 2022.
6
Development of a novel necroptosis-associated miRNA risk signature to evaluate the prognosis of colon cancer patients.一种用于评估结肠癌患者预后的新型坏死性凋亡相关微小RNA风险特征的开发。
Ann Transl Med. 2021 Dec;9(24):1800. doi: 10.21037/atm-21-6576.
7
A Novel Defined Necroptosis-Related miRNAs Signature for Predicting the Prognosis of Colon Cancer.一种用于预测结肠癌预后的新型坏死性凋亡相关微小RNA特征
Int J Gen Med. 2022 Jan 13;15:555-565. doi: 10.2147/IJGM.S349624. eCollection 2022.
8
m5C-Atlas: a comprehensive database for decoding and annotating the 5-methylcytosine (m5C) epitranscriptome.m5C-Atlas:一个全面的数据库,用于解码和注释 5-甲基胞嘧啶(m5C)转录组内表观遗传学修饰。
Nucleic Acids Res. 2022 Jan 7;50(D1):D196-D203. doi: 10.1093/nar/gkab1075.
9
ECM-Receptor Regulatory Network and Its Prognostic Role in Colorectal Cancer.ECM受体调控网络及其在结直肠癌中的预后作用。
Front Genet. 2021 Dec 6;12:782699. doi: 10.3389/fgene.2021.782699. eCollection 2021.
10
. protects glomerular endothelial cells via the miR155-H2AC6 interaction network in hypertensive renal injury.. 通过miR155-H2AC6相互作用网络在高血压肾损伤中保护肾小球内皮细胞。
Ann Transl Med. 2021 Nov;9(21):1626. doi: 10.21037/atm-21-5641.