West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), University of Ghana, LG 54, Accra, Ghana.
Division of Human Genetics, Faculty of Health Sciences, University of Cape Town, Cape Town, 7925, South Africa.
BMC Med Genomics. 2022 Nov 10;15(1):237. doi: 10.1186/s12920-022-01391-w.
Childhood hearing impairment (HI) is genetically heterogeneous with many implicated genes, however, only a few of these genes are reported in African populations.
This study used exome and Sanger sequencing to resolve the possible genetic cause of non-syndromic HI in a Ghanaian family.
We identified a novel variant c.3041G > A: p.(Gly1014Glu) in GREB1L (DFNA80) in the index case. The GREB1L: p.(Gly1014Glu) variant had a CADD score of 26.5 and was absent from human genomic databases such as TopMed and gnomAD. In silico homology protein modeling approaches displayed major structural differences between the wildtype and mutant proteins. Additionally, the variant was predicted to probably affect the secondary protein structure that may impact its function. Publicly available expression data shows a higher expression of Greb1L in the inner ear of mice during development and a reduced expression in adulthood, underscoring its importance in the development of the inner ear structures.
This report on an African individual supports the association of GREB1L variant with non-syndromic HI and extended the evidence of the implication of GREB1L variants in HI in diverse populations.
儿童听力障碍(HI)在遗传上具有异质性,涉及许多相关基因,但这些基因在非洲人群中的报道较少。
本研究使用外显子组和 Sanger 测序来解析加纳一个家系中非综合征性 HI 的可能遗传原因。
我们在索引病例中发现了一个新的 GREB1L(DFNA80)变异 c.3041G > A:p.(Gly1014Glu)。GREB1L:p.(Gly1014Glu)变异的 CADD 得分为 26.5,不存在于 TopMed 和 gnomAD 等人类基因组数据库中。同源蛋白结构预测显示,野生型和突变型蛋白之间存在主要的结构差异。此外,该变异可能会影响蛋白质的二级结构,从而影响其功能。公开的表达数据显示,在发育过程中,Greb1L 在小鼠内耳中的表达较高,而在成年期表达降低,这突显了其在内耳结构发育中的重要性。
本报告涉及一名非洲个体,支持 GREB1L 变异与非综合征性 HI 的关联,并扩展了 GREB1L 变异在不同人群中与 HI 相关的证据。