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糖酵解相关的溶质载体家族2成员1(SLC2A1)是一种用于预后和免疫治疗的潜在泛癌生物标志物。

Glycolysis-Related SLC2A1 Is a Potential Pan-Cancer Biomarker for Prognosis and Immunotherapy.

作者信息

Zheng Haosheng, Long Guojie, Zheng Yuzhen, Yang Xingping, Cai Weijie, He Shiyun, Qin Xianyu, Liao Hongying

机构信息

Department of Thoracic Surgery, Thoracic Cancer Center, The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou 510655, China.

Guangdong Research Institute of Gastroenterology, The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou 510655, China.

出版信息

Cancers (Basel). 2022 Oct 29;14(21):5344. doi: 10.3390/cancers14215344.

Abstract

SLC2A1 plays a pivotal role in cancer glycometabolism. SLC2A1 has been proposed as a putative driver gene in various cancers. However, a pan-cancer analysis of SLC2A1 has not yet been performed. In this study, we explored the expression and prognosis of SLC2A1 in pan-cancer across multiple databases. We conducted genetic alteration, epigenetic, and functional enrichment analyses of SLC2A. We calculated the correlation between SLC2A1 and tumor microenvironment using the TCGA pan-cancer dataset. We observed high expression levels of SLC2A1 with poor prognosis in most cancers. The overall genetic alteration frequency of SLC2A1 was 1.8% in pan-cancer, and the SLC2A1 promoter was hypomethylation in several cancers. Most m6A-methylation-related genes positively correlated with the expression of SLC2A1 in 33 TCGA cancers. Moreover, SLC2A1 was mainly related to the functions including epithelial-mesenchymal transition, glycolysis, hypoxia, cell-cycle regulation, and DNA repair. Finally, SLC2A1 positively associated with neutrophils and cancer-associated fibroblasts in the tumor microenvironment of most cancers and significantly correlated with TMB and MSI in various cancers. Notably, SLC2A1 was remarkably positively correlated with PD-L1 and CTLA4 in most cancers. SLC2A1 might serve as an attractive pan-cancer biomarker for providing new insights into cancer therapeutics.

摘要

溶质载体家族2成员1(SLC2A1)在癌症糖代谢中起关键作用。SLC2A1已被提出作为多种癌症中的一个假定驱动基因。然而,尚未对SLC2A1进行泛癌分析。在本研究中,我们在多个数据库中探索了SLC2A1在泛癌中的表达和预后情况。我们对SLC2A进行了基因改变、表观遗传和功能富集分析。我们使用TCGA泛癌数据集计算了SLC2A1与肿瘤微环境之间的相关性。我们观察到在大多数癌症中,SLC2A1表达水平高且预后不良。SLC2A1在泛癌中的总体基因改变频率为1.8%,并且在几种癌症中SLC2A1启动子呈低甲基化状态。在33种TCGA癌症中,大多数与N6-甲基腺苷(m6A)甲基化相关的基因与SLC2A1的表达呈正相关。此外,SLC2A1主要与上皮-间质转化、糖酵解、缺氧、细胞周期调控和DNA修复等功能相关。最后,在大多数癌症的肿瘤微环境中,SLC2A1与中性粒细胞和癌症相关成纤维细胞呈正相关,并且在各种癌症中与肿瘤突变负荷(TMB)和微卫星不稳定性(MSI)显著相关。值得注意的是,在大多数癌症中,SLC2A1与程序性死亡受体1配体(PD-L1)和细胞毒性T淋巴细胞相关蛋白4(CTLA4)显著正相关。SLC2A1可能作为一种有吸引力的泛癌生物标志物,为癌症治疗提供新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab60/9657346/f3729180d5ed/cancers-14-05344-g001.jpg

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