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针对选定的大环内酯类抗生素的计算研究 与氘代氯仿中泰乐菌素 A 的 NMR 研究相结合。

Computational Studies on Selected Macrolides Active against Combined with the NMR Study of Tylosin A in Deuterated Chloroform.

机构信息

Division of Pharmacy and Optometry, School of Health Sciences, University of Manchester, Oxford Road, Manchester M13 9PT, UK.

Department of Chemistry, Faculty of Sciences and Mathematics, University of Nis, Visegradska 33, 18000 Nis, Serbia.

出版信息

Molecules. 2022 Oct 26;27(21):7280. doi: 10.3390/molecules27217280.

Abstract

Although many antibiotics are active against Gram-positive bacteria, fewer also show activity against Gram-negative bacteria. Here, we present a combination of in silico (electron ion-interaction potential, molecular docking, ADMET), NMR, and microbiological investigations of selected macrolides (14-membered, 15-membered, and 16-membered), aiming to discover the pattern of design for macrolides active against Gram-negative bacteria. Although the conformational studies of 14-membered and 15-membered macrolides are abundant in the literature, 16-membered macrolides, and their most prominent representative tylosin A, have received relatively little research attention. We therefore report the complete H and C NMR assignment of tylosin A in deuterated chloroform, as well as its 3D solution structure determined through molecular modelling (conformational search) and 2D ROESY NMR. Additionally, due to the degradation of tylosin A in deuterated chloroform, other species were also detected in 1D and 2D NMR spectra. We additionally studied the anti-bacterial activity of tylosin A and B against selected Gram-positive and Gram-negative bacteria.

摘要

尽管许多抗生素对革兰氏阳性菌具有活性,但对革兰氏阴性菌也具有活性的抗生素却较少。在这里,我们结合了计算机模拟(电子离子相互作用势、分子对接、ADMET)、NMR 和对选定大环内酯类药物(14 元、15 元、16 元)的微生物学研究,旨在发现对革兰氏阴性菌具有活性的大环内酯类药物的设计模式。尽管 14 元和 15 元大环内酯类药物的构象研究在文献中很丰富,但 16 元大环内酯类药物及其最突出的代表泰乐菌素 A 相对较少受到关注。因此,我们报告了泰乐菌素 A 在氘代氯仿中的完整 H 和 C NMR 分配,以及通过分子建模(构象搜索)和 2D ROESY NMR 确定的其 3D 溶液结构。此外,由于泰乐菌素 A 在氘代氯仿中降解,在 1D 和 2D NMR 谱中还检测到其他物质。我们还研究了泰乐菌素 A 和 B 对选定的革兰氏阳性和革兰氏阴性菌的抗菌活性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2859/9654277/fbdf380b0436/molecules-27-07280-g001.jpg

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