Zuo Biao, Zuo Ling, Du Xu-Qin, Yuan Su, Xuan Chen, Zhang Yu-Di, Chen Zhi-Wei, Cao Wen-Fu
College of Traditional Chinese Medicine, Chongqing Medical University, Chongqing, China.
Chongqing Key Laboratory of Traditional Chinese Medicine for Prevention and Cure of Metabolic Diseases, Chongqing, China.
Front Pharmacol. 2022 Oct 28;13:1033919. doi: 10.3389/fphar.2022.1033919. eCollection 2022.
In treating pulmonary fibrosis (PF), traditional Chinese medicine (TCM) has received much attention, but its mechanism is unclear. The pharmacological mechanisms of TCM can be explored through network pharmacology. However, due to its virtual screening properties, it still needs to be verified by or experiments. Therefore, we investigated the anti-PF mechanism of Yiqi Huayu Decoction (YHD) by combining network pharmacology with experiments. Firstly, we used classical bleomycin (BLM)-induced rat model of PF and administrated fibrotic rats with YHD (low-, medium-, and high-dose). We comprehensively assessed the treatment effect of YHD according to body weight, lung coefficient, lung function, and histopathologic examination. Second, we predict the potential targets by ultra-high-performance liquid chromatography-tandem mass spectrometry (UHPLC-MS/MS) combined with network pharmacology. In brief, we obtained the chemical ingredients of YHD based on the UHPLC-MS/MS and TCMSP database. We collected drug targets from TCMSP, HERB, and Swiss target prediction databases based on active ingredients. Disease targets were acquired from drug libraries, Genecards, HERB, and TTD databases. The intersecting targets of drugs and disease were screened out. The STRING database can obtain protein-protein interaction (PPI) networks and hub target proteins. Molecular Complex Detection (MCODE) clustering analysis combined with enrichment analysis can explore the possible biological mechanisms of YHD. Enrichment analyses were conducted through the R package and the David database, including the Kyoto Encyclopedia of Genes and Genomes (KEGG), Gene Ontology (GO), and Reactome. Then, we further validated the target genes and target proteins predicted by network pharmacology. Protein and gene expression detection by immunohistochemistry, Western blot (WB), and real-time quantitative PCR (rt-qPCR). The results showed that high-dose YHD effectively attenuated BLM-induced lung injury and fibrosis in rats, as evidenced by improved lung function, relief of inflammatory response, and reduced collagen deposition. We screened nine core targets and cellular senescence pathways by UHPLC-MS/MS analysis and network pharmacology. We subsequently validated key targets of cellular senescence signaling pathways. WB and rt-qPCR indicated that high-dose YHD decreased protein and gene expression of senescence-related markers, including p53 (TP53), p21 (CDKN1A), and p16 (CDKN2A). Increased reactive oxygen species (ROS) are upstream triggers of the senescence program. The senescence-associated secretory phenotypes (SASPs), containing interleukin 6 (IL-6), tumor necrosis factor-alpha (TNF-α), and transforming growth factor-β1 (TGF-β1), can further exacerbate the progression of senescence. High-dose YHD inhibited ROS production in lung tissue and consistently reduced the SASPs expression in serum. Our study suggests that YHD improves lung pathological injury and lung function in PF rats. This protective effect may be related to the ability of YHD to inhibit cellular senescence.
在治疗肺纤维化(PF)方面,中药受到了广泛关注,但其作用机制尚不清楚。中药的药理机制可通过网络药理学进行探索。然而,由于其虚拟筛选特性,仍需通过实验或实验进行验证。因此,我们通过将网络药理学与实验相结合,研究了益气化瘀汤(YHD)抗PF的机制。首先,我们使用经典的博来霉素(BLM)诱导的大鼠PF模型,并用YHD(低、中、高剂量)对纤维化大鼠进行给药。我们根据体重、肺系数、肺功能和组织病理学检查全面评估了YHD的治疗效果。其次,我们通过超高效液相色谱-串联质谱(UHPLC-MS/MS)结合网络药理学预测潜在靶点。简而言之,我们基于UHPLC-MS/MS和TCMSP数据库获得了YHD的化学成分。我们基于活性成分从TCMSP、HERB和瑞士靶点预测数据库中收集药物靶点。疾病靶点从药物库、Genecards、HERB和TTD数据库中获取。筛选出药物与疾病的交集靶点。STRING数据库可获得蛋白质-蛋白质相互作用(PPI)网络和枢纽靶点蛋白。分子复合物检测(MCODE)聚类分析结合富集分析可探索YHD可能的生物学机制。通过R包和David数据库进行富集分析,包括京都基因与基因组百科全书(KEGG)、基因本体论(GO)和Reactome。然后,我们进一步验证了网络药理学预测的靶基因和靶蛋白。通过免疫组织化学、蛋白质印迹(WB)和实时定量PCR(rt-qPCR)检测蛋白质和基因表达。结果表明,高剂量YHD有效减轻了BLM诱导的大鼠肺损伤和纤维化,肺功能改善、炎症反应缓解和胶原沉积减少证明了这一点。我们通过UHPLC-MS/MS分析和网络药理学筛选出九个核心靶点和细胞衰老途径。随后,我们验证了细胞衰老信号通路的关键靶点。WB和rt-qPCR表明,高剂量YHD降低了衰老相关标志物的蛋白质和基因表达,包括p53(TP53)、p21(CDKN1A)和p16(CDKN2A)。活性氧(ROS)增加是衰老程序的上游触发因素。包含白细胞介素6(IL-6)、肿瘤坏死因子-α(TNF-α)和转化生长因子-β1(TGF-β1)的衰老相关分泌表型(SASPs)可进一步加剧衰老进程。高剂量YHD抑制肺组织中ROS的产生,并持续降低血清中SASPs的表达。我们的研究表明,YHD改善了PF大鼠的肺病理损伤和肺功能。这种保护作用可能与YHD抑制细胞衰老的能力有关。