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蠵龟(丽龟属物种)的全球系统地理学:进化、种群统计学、连通性与保护

Global phylogeography of ridley sea turtles ( spp.): evolution, demography, connectivity, and conservation.

作者信息

Vilaça Sibelle Torres, Hahn Anelise Torres, Naro-Maciel Eugenia, Abreu-Grobois F Alberto, Bowen Brian W, Castilhos Jaqueline C, Ciofi Claudio, FitzSimmons Nancy N, Jensen Michael P, Formia Angela, Limpus Colin J, Natali Chiara, Soares Luciano S, de Thoisy Benoit, Whiting Scott D, Bonatto Sandro L

机构信息

Department of Life Sciences and Biotechnology, University of Ferrara, Ferrara, Italy.

Escola de Ciências da Saúde e da Vida, Pontifícia Universidade Católica do Rio Grande do Sul, Av. Ipiranga, 668, 90619-900 Porto Alegre, RS Brazil.

出版信息

Conserv Genet. 2022;23(6):995-1010. doi: 10.1007/s10592-022-01465-3. Epub 2022 Aug 29.

Abstract

UNLABELLED

Globally distributed marine taxa are well suited for investigations of biogeographic impacts on genetic diversity, connectivity, and population demography. The sea turtle genus includes the wide-ranging and abundant olive ridley (), and the geographically restricted and 'Critically Endangered' Kemp's ridley (). To investigate their historical biogeography, we analyzed a large dataset of mitochondrial DNA (mtDNA) sequences from olive (n = 943) and Kemp's (n = 287) ridleys, and genotyped 15 nuclear microsatellite loci in a global sample of olive ridleys (n  285). We found that the ridley species split ~ 7.5 million years ago, before the Panama Isthmus closure. The most ancient mitochondrial olive ridley lineage, located in the Indian Ocean, was dated to ~ 2.2 Mya. Both mitochondrial and nuclear markers revealed significant structure for olive ridleys between Atlantic (ATL), East Pacific (EP), and Indo-West Pacific (IWP) areas. However, the divergence of mtDNA clades was very recent (< 1 Mya) with low within- clade diversity, supporting a recurrent extinction-recolonization model for these ocean regions. All data showed that ATL and IWP groups were more closely related than those in the EP, with mtDNA data supporting recent recolonization of the ATL from the IWP. Individual olive ridley dispersal between the ATL, EP, and IN/IWP could be interpreted as more male- than female-biased, and genetic diversity was lowest in the Atlantic Ocean. All populations showed signs of recent expansion, and estimated time frames were concordant with their recent colonization history. Investigating species abundance and distribution changes over time is central to evolutionary biology, and this study provides a historical biogeographic context for marine vertebrate conservation and management.

SUPPLEMENTARY INFORMATION

The online version contains supplementary material available at 10.1007/s10592-022-01465-3.

摘要

未标注

全球分布的海洋生物分类群非常适合用于研究生物地理学对遗传多样性、连通性和种群人口统计学的影响。海龟属包括分布广泛且数量众多的榄蠵龟(),以及地理分布受限且“极度濒危”的肯氏龟()。为了研究它们的历史生物地理学,我们分析了来自榄蠵龟(n = 943)和肯氏龟(n = 287)的大量线粒体DNA(mtDNA)序列数据集,并对全球榄蠵龟样本(n = 285)中的15个核微卫星位点进行了基因分型。我们发现蠵龟物种在约750万年前巴拿马地峡封闭之前就已分化。位于印度洋的最古老的线粒体榄蠵龟谱系可追溯到约220万年前。线粒体和核标记都显示出榄蠵龟在大西洋(ATL)、东太平洋(EP)和印度 - 西太平洋(IWP)区域之间存在显著的结构差异。然而,mtDNA分支的分化非常近(<100万年前),分支内多样性较低,支持这些海洋区域的反复灭绝 - 重新定殖模型。所有数据表明,ATL和IWP群体比EP群体关系更密切,mtDNA数据支持ATL近期从IWP重新定殖。榄蠵龟个体在ATL、EP和IN/IWP之间的扩散可以解释为雄性偏向大于雌性偏向,并且大西洋的遗传多样性最低。所有种群都显示出近期扩张的迹象,估计的时间框架与其近期的定殖历史一致。研究物种丰度和分布随时间的变化是进化生物学的核心,本研究为海洋脊椎动物的保护和管理提供了历史生物地理学背景。

补充信息

在线版本包含可在10.1007/s10592 - 022 - 01465 - 3获取的补充材料。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47c1/9659502/af10f69cb75b/10592_2022_1465_Fig1_HTML.jpg

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