Department of Chemical Biology, Max Planck Institute of Molecular Physiology, Dortmund 44227, Germany.
Faculty of Chemistry, Chemical Biology, Technical University Dortmund, Dortmund 44227, Germany.
J Med Chem. 2022 Dec 22;65(24):16268-16289. doi: 10.1021/acs.jmedchem.2c00956. Epub 2022 Dec 2.
Identification and analysis of small molecule bioactivity in target-agnostic cellular assays and monitoring changes in phenotype followed by identification of the biological target are a powerful approach for the identification of novel bioactive chemical matter in particular when the monitored phenotype is disease-related and physiologically relevant. Profiling methods that enable the unbiased analysis of compound-perturbed states can suggest mechanisms of action or even targets for bioactive small molecules and may yield novel insights into biology. Here we report the enantioselective synthesis of natural-product-inspired 8-oxotetrahydroprotoberberines and the identification of Picoberin, a low picomolar inhibitor of Hedgehog (Hh)-induced osteoblast differentiation. Global transcriptome and proteome profiling revealed the aryl hydrocarbon receptor (AhR) as the molecular target of this compound and identified a cross talk between Hh and AhR signaling during osteoblast differentiation.
在无靶点的细胞检测中鉴定和分析小分子的生物活性,并监测表型的变化,随后鉴定生物靶标,这是一种特别当监测的表型与疾病相关且具有生理相关性时,鉴定新型生物活性化学物质的有效方法。能够进行化合物干扰状态无偏分析的分析方法可以提示生物活性小分子的作用机制甚至靶标,并且可能为生物学提供新的见解。在这里,我们报告了天然产物启发的 8-氧四氢原小檗碱的对映选择性合成,并鉴定了 Picoberin,一种低皮摩尔抑制 Hedgehog(Hh)诱导的成骨细胞分化的抑制剂。全转录组和蛋白质组谱分析显示,该化合物的分子靶标为芳香烃受体(AhR),并在成骨细胞分化过程中鉴定出 Hh 和 AhR 信号之间的串扰。