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初步研究降解产物阻遏基因敲除对恶臭假单胞菌 DLL-E4 降解对硝基苯酚的影响。

Preliminary study on the effect of catabolite repression gene knockout on p-nitrophenol degradation in Pseudomonas putida DLL-E4.

机构信息

College of Life and Environmental Science, Wenzhou University, Wenzhou, People's Republic of China.

National and Local Joint Engineering Research Center for Ecological Treatment Technology of Urban Water Pollution, Wenzhou University, Wenzhou, People's Republic of China.

出版信息

PLoS One. 2022 Dec 2;17(12):e0278503. doi: 10.1371/journal.pone.0278503. eCollection 2022.

DOI:10.1371/journal.pone.0278503
PMID:36459525
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9718395/
Abstract

P-nitrophenol (PNP) is a carcinogenic, teratogenic, and mutagenic compound that can cause serious harm to the environment. A strain of Pseudomonas putida DLL-E4, can efficiently degrade PNP in a complex process that is influenced by many factors. Previous studies showed that the expression level of pnpA, a key gene involved in PNP degradation, was upregulated significantly and the degradation of PNP was obviously accelerated in the presence of glucose. In addition, the expression of crc, crcY, and crcZ, key genes involved in catabolite repression, was downregulated, upregulated, and upregulated, respectively. To investigate the effect of the carbon catabolite repression (CCR) system on PNP degradation, the crc, crcY, and crcZ genes were successfully knocked out by conjugation experiments. Our results showed that the knockout of crc accelerated PNP degradation but slowed down the cell growth. However, the knockout of crcY or crcZ alone accelerated PNP degradation when PNP as the sole carbon source, but that knockout slowed down PNP degradation when glucose was added. The results indicate that the CCR system is involved in the regulation of PNP degradation, and further work is required to determine the details of the specific regulatory mechanism.

摘要

对硝基苯酚(PNP)是一种致癌、致畸和致突变的化合物,会对环境造成严重危害。恶臭假单胞菌 DLL-E4 菌株可以通过一个复杂的过程高效降解 PNP,这个过程受许多因素影响。先前的研究表明,参与 PNP 降解的关键基因 pnpA 的表达水平显著上调,并且在葡萄糖存在的情况下,PNP 的降解明显加快。此外,参与分解代谢物阻遏的关键基因 crc、crcY 和 crcZ 的表达分别下调、上调和上调。为了研究碳分解代谢物阻遏(CCR)系统对 PNP 降解的影响,通过接合实验成功敲除了 crc、crcY 和 crcZ 基因。结果表明,crc 的敲除加速了 PNP 的降解,但减缓了细胞的生长。然而,当 PNP 作为唯一的碳源时,crcY 或 crcZ 的单独敲除会加速 PNP 的降解,但当添加葡萄糖时,PNP 的降解会减缓。结果表明,CCR 系统参与了 PNP 降解的调控,需要进一步的工作来确定具体调控机制的细节。

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本文引用的文献

1
The Regulation of para-Nitrophenol Degradation in Pseudomonas putida DLL-E4.恶臭假单胞菌DLL-E4中对硝基苯酚降解的调控
PLoS One. 2016 May 18;11(5):e0155485. doi: 10.1371/journal.pone.0155485. eCollection 2016.
2
Draft Genome Sequence of Burkholderia cenocepacia Strain CEIB S5-2, a Methyl Parathion- and p-Nitrophenol-Degrading Bacterium, Isolated from Agricultural Soils in Morelos, Mexico.从墨西哥莫雷洛斯州农业土壤中分离得到的甲基对硫磷和对硝基苯酚降解菌洋葱伯克霍尔德菌CEIB S5-2的基因组序列草图
Genome Announc. 2016 Apr 28;4(2):e00220-16. doi: 10.1128/genomeA.00220-16.
3
Characterization of para-Nitrophenol-Degrading Bacterial Communities in River Water by Using Functional Markers and Stable Isotope Probing.
利用功能标记和稳定同位素探针对河水中对硝基苯酚降解细菌群落进行表征
Appl Environ Microbiol. 2015 Oct;81(19):6890-900. doi: 10.1128/AEM.01794-15. Epub 2015 Jul 24.
4
Transcriptional activation of multiple operons involved in para-nitrophenol degradation by Pseudomonas sp. Strain WBC-3.假单胞菌属菌株WBC-3中参与对硝基苯酚降解的多个操纵子的转录激活。
Appl Environ Microbiol. 2015 Jan;81(1):220-30. doi: 10.1128/AEM.02720-14. Epub 2014 Oct 17.
5
Complete Genome Sequence of the p-Nitrophenol-Degrading Bacterium Pseudomonas putida DLL-E4.对硝基苯酚降解菌恶臭假单胞菌DLL-E4的全基因组序列
Genome Announc. 2014 Jun 19;2(3):e00596-14. doi: 10.1128/genomeA.00596-14.
6
Induction and carbon catabolite repression of phenol degradation genes in Rhodococcus erythropolis and Rhodococcus jostii.红平红球菌和约氏红球菌中苯酚降解基因的诱导及碳分解代谢物阻遏
Appl Microbiol Biotechnol. 2014 Oct;98(19):8267-79. doi: 10.1007/s00253-014-5881-6. Epub 2014 Jun 18.
7
Branching of the p-nitrophenol (PNP) degradation pathway in burkholderia sp. Strain SJ98: Evidences from genetic characterization of PNP gene cluster.分枝杆菌属 SJ98 菌株中对 p-硝基苯酚(PNP)降解途径的分支:PNP 基因簇遗传特征的证据。
AMB Express. 2012 Jun 8;2(1):30. doi: 10.1186/2191-0855-2-30.
8
Two small RNAs, CrcY and CrcZ, act in concert to sequester the Crc global regulator in Pseudomonas putida, modulating catabolite repression.两个小 RNA,CrcY 和 CrcZ,协同作用将 Pseudomonas putida 中的 Crc 全局调节物隔离,调节分解代谢物阻遏。
Mol Microbiol. 2012 Jan;83(1):24-40. doi: 10.1111/j.1365-2958.2011.07912.x. Epub 2011 Nov 20.
9
Identification and characterization of another 4-nitrophenol degradation gene cluster, nps, in Rhodococcus sp. strain PN1.鉴定和表征 Rhodococcus sp. strain PN1 中另一个 4-硝基苯酚降解基因簇 nps。
J Biosci Bioeng. 2011 Jun;111(6):687-94. doi: 10.1016/j.jbiosc.2011.01.016. Epub 2011 Mar 10.
10
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Environ Microbiol. 2010 Dec;12(12):3196-212. doi: 10.1111/j.1462-2920.2010.02292.x.