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在 BXD 品系的小鼠遗传参考群体中进行超声心动图表型分析揭示了与心脏功能和形态相关的重要 QTL。

Echocardiography phenotyping in murine genetic reference population of BXD strains reveals significant QTLs associated with cardiac function and morphology.

机构信息

Department of Pediatrics, University of Tennessee Health Science Center, Memphis, Tennessee.

Children's Foundation Research Institute, Le Bonheur Children's Hospital, Memphis, Tennessee.

出版信息

Physiol Genomics. 2023 Feb 1;55(2):51-66. doi: 10.1152/physiolgenomics.00120.2022. Epub 2022 Dec 19.

Abstract

The genetic reference population of recombinant inbred BXD mice has been derived from crosses between C57BL/6J and DBA/2J strains. The DBA/2J parent exhibits cardiomyopathy phenotypes, whereas C57BL/6J has normal heart. BXD mice are sequenced for studying genetic interactions in cardiomyopathies. The study aimed to assess cardiomyopathy traits in BXDs and investigate the quantitative genetic architecture of those traits. Echocardiography, blood pressure, and cardiomyocyte size parameters obtained from 44 strains of BXD family ( > 5/sex) at 4-5 mo of age were associated with heart transcriptomes and expression quantitative trait loci (eQTL) mapping was performed. More than twofold variance in ejection fraction (EF%), fractional shortening (FS%), left ventricular volumes (LVVols), internal dimensions (LVIDs), mass (LVM), and posterior wall (LVPW) thickness was found among BXDs. In male BXDs, eQTL mapping identified on chromosome 8 QTL to be positively correlated with LVVol and LVID and negatively associated with cardiomyocyte diameter. In female BXDs, significant QTLs were found on chromosomes 7 and 3 to be associated with LVPW and EF% and FS%, respectively, and , , and were predicted as strong candidate genes. Our study found variable cardiovascular traits among BXD strains and identified multiple associated QTLs, suggesting an influence of genetic background on expression of echocardiographic and cardiomyocyte diameter traits. Increased LVVol and reduced EF% and FS% represented dilated cardiomyopathy, whereas increased LV mass and wall thickness indicated hypertrophic cardiomyopathy traits. The BXD family is ideal for identifying candidate genes, causal and modifier, that influence cardiovascular phenotypes. This study aimed to establish a cardiac phenotype-genotype correlation in murine genetic reference population of BXD RI strains by phenotyping the echocardiography, blood pressure, and cardiomyocyte diameter traits and associating each collected phenotype with genetic background. Our study identified several QTLs and candidate genes that have significant association with cardiac hypertrophy, ventricular dilation, and function including systolic hyperfunction and dysfunction.

摘要

重组近交系 BXD 小鼠的遗传参考群体源自 C57BL/6J 和 DBA/2J 品系的杂交。DBA/2J 亲本表现出心肌病表型,而 C57BL/6J 则具有正常心脏。BXD 小鼠被测序用于研究心肌病中的遗传相互作用。本研究旨在评估 BXD 中的心肌病特征,并研究这些特征的定量遗传结构。从 44 个 BXD 家族品系(> 5/性别)中获得的 4-5 月龄的超声心动图、血压和心肌细胞大小参数与心脏转录组相关,并进行了数量性状基因座(eQTL)映射。在 BXDs 中发现射血分数(EF%)、缩短分数(FS%)、左心室容积(LVVols)、内部尺寸(LVIDs)、质量(LVM)和后壁(LVPW)厚度的两倍以上差异。在雄性 BXDs 中,eQTL 图谱确定了第 8 号染色体上的一个 QTL 与 LVVol 和 LVID 呈正相关,与心肌细胞直径呈负相关。在雌性 BXDs 中,发现第 7 号和第 3 号染色体上有显著的 QTL 与 LVPW 和 EF%和 FS%相关,和 、 、 和 被预测为强候选基因。我们的研究发现 BXD 品系之间存在不同的心血管特征,并确定了多个相关的 QTL,这表明遗传背景对超声心动图和心肌细胞直径特征的表达有影响。LVVol 增加和 EF%和 FS%减少表示扩张型心肌病,而 LV 质量和壁厚度增加表示肥厚型心肌病特征。BXD 家族是鉴定影响心血管表型的候选基因、因果和修饰基因的理想选择。本研究旨在通过表型超声心动图、血压和心肌细胞直径特征,并将每个收集的表型与遗传背景相关联,在 BXD RI 品系的遗传参考群体中建立心脏表型-基因型相关性。我们的研究确定了几个与心脏肥大、心室扩张和功能(包括收缩功能亢进和功能障碍)有显著关联的 QTL 和候选基因。

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