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遗传密码扩展以实现活细胞中功能性 G 蛋白偶联受体的定点生物正交标记。

Genetic code expansion to enable site-specific bioorthogonal labeling of functional G protein-coupled receptors in live cells.

机构信息

Laboratory of Chemical Biology and Signal Transduction, The Rockefeller University, New York, New York, USA.

Tri-Institutional PhD Program in Chemical Biology, New York, New York, USA.

出版信息

Protein Sci. 2023 Feb;32(2):e4550. doi: 10.1002/pro.4550.

Abstract

For use in site-specific bioorthogonal labeling of expressed G protein-coupled receptors (GPCRs) in live cells, we developed a luciferase-based reporter assay. The assay was used to compare amber codon suppression efficiency, receptor functionality, and efficiency of different bioorthogonal labeling chemistries. We used the assay system to compare side-by-side the efficiency of incorporation of three different noncanonical amino acids [4-azido-l-phenylalanine (azF), cyclopropene-l-lysine (CpK), and trans-cyclooct-2-en-l-lysine (TCOK)] at three different sites on a GPCR using three different genetic code expansion plasmid systems. As a model GPCR, we engineered an epitope-tagged C-C chemokine receptor 5 (CCR5)-RLuc3 fusion for expression in HEK293T cells. Satisfactory incorporation of azF, CpK, and TCOK into heterologously expressed CCR5 was achieved. We also carried out cell-based calcium mobilization assays to measure the function of the engineered CCR5, and in the same cells, we performed bioorthogonal labeling of the engineered mutants using heterobivalent compounds containing bioorthogonal tethering groups linked to either a small-molecule fluorophore or a peptide. Favorable reaction kinetics of tetrazine-containing compounds with CCR5 harboring TCOK was observed. However, bioorthogonal labeling in live cells of CCR5 harboring CpK with tetrazine-containing compounds using the inverse electron demand Diels-Alder ligation was overall slightly more efficient than other reactions tested.

摘要

为了在活细胞中对表达的 G 蛋白偶联受体 (GPCR) 进行特定部位的生物正交标记,我们开发了一种基于荧光素酶的报告基因检测法。该检测法用于比较琥珀终止密码子抑制效率、受体功能和不同生物正交标记化学物质的效率。我们使用该检测系统,并排比较了三种不同的非天然氨基酸[4-叠氮基-l-苯丙氨酸(azF)、环丙烯基-l-赖氨酸(CpK)和反式-环辛-2-烯-l-赖氨酸(TCOK)]在三种不同的遗传密码扩展质粒系统中在 GPCR 上三个不同位置的掺入效率。作为模型 GPCR,我们设计了一个表位标记的 C-C 趋化因子受体 5(CCR5)-RLuc3 融合蛋白,用于在 HEK293T 细胞中表达。成功地将 azF、CpK 和 TCOK 掺入异源表达的 CCR5 中。我们还进行了基于细胞的钙动员测定以测量工程化的 CCR5 的功能,并且在相同的细胞中,我们使用包含生物正交连接基团的双价化合物对工程化的突变体进行生物正交标记,该连接基团连接到小分子荧光团或肽上。观察到含有 TCOK 的 CCR5 与含四嗪的化合物的有利反应动力学。然而,使用包含四嗪的化合物通过逆电子需求 Diels-Alder 键合对含有 CpK 的 CCR5 进行活细胞生物正交标记的总体效率略高于其他测试的反应。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb11/9847076/90089be1ad08/PRO-32-e4550-g004.jpg

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