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分析网络药理学和分子对接技术,阐明独活寄生汤缓解骨关节炎的潜在机制。

Analyzing network pharmacology and molecular docking to clarify Duhuo Jisheng decoction potential mechanism of osteoarthritis mitigation.

机构信息

Changchun University of Chinese Medicine, Changchun, Jilin, China.

The Third Affiliated Hospital of the Changchun University of Chinese Medicine, Changchun, Jilin, China.

出版信息

Medicine (Baltimore). 2022 Dec 16;101(50):e32132. doi: 10.1097/MD.0000000000032132.

Abstract

As a classic remedy for treating Osteoarthritis (OA), Duhuo Jisheng decoction has successfully treated countless patients. Nevertheless, its specific mechanism is unknown. This study explored the active constituents of Duhuo Jisheng decoction and the potential molecular mechanisms for treating OA using a Network Pharmacology approaches. Screening active components and corresponding targets of Duhuo parasite decoction by traditional Chinese medicine systems pharmacology database and analysis platform database. Combining the following databases yielded OA disease targets: GeneCards, DrugBank, PharmGkb, Online Mendelian Inheritance in Man, and therapeutic target database. The interaction analysis of the herb-active ingredient-core target network and protein-protein interaction protein network was constructed by STRING platform and Cytoscape software. Gene ontology functional enrichment analysis and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analysis were carried out. PyMOL and other software were used to verify the molecular docking between the essential active components and the core target. 262 active ingredients were screened, and their main components were quercetin, kaempferol, wogonin, baicalein, and beta-carotene. 108 intersection targets of disease and drug were identified, and their main components were RELA, FOS, STAT3, MAPK14, MAPK1, JUN, and ESR1. Gene ontology analysis showed that the key targets were mainly involved in biological processes such as response to lipopolysaccharide, response to xenobiotic stimulus, and response to nutrient levels. The results of Kyoto Encyclopedia of Genes and Genomes analysis show that the signal pathways include the AGE - RAGE signaling pathway, IL - 17 signaling pathway, TNF signaling pathway, and Toll - like receptor signaling pathway. Molecular docking showed that the main active components of Duhuo parasitic decoction had a good bonding activity with the key targets in treating OA. Duhuo Jisheng decoction can reduce the immune-inflammatory reaction, inhibit apoptosis of chondrocytes, strengthen proliferation and repair of chondrocytes and reduce the inflammatory response in a multi-component-multi-target-multi-pathway way to play a role in the treatment of OA.

摘要

独活寄生汤作为治疗骨关节炎(OA)的经典方剂,已成功治愈了无数患者。然而,其具体机制尚不清楚。本研究采用网络药理学方法探讨独活寄生汤的活性成分及其治疗 OA 的潜在分子机制。通过中药系统药理学数据库和分析平台数据库筛选独活寄生汤的活性成分和相应靶点。结合以下数据库获得 OA 疾病靶点:GeneCards、DrugBank、PharmGkb、Online Mendelian Inheritance in Man 和治疗靶点数据库。通过 STRING 平台和 Cytoscape 软件构建草药-活性成分-核心靶点网络和蛋白质-蛋白质相互作用网络的相互作用分析。进行基因本体论功能富集分析和京都基因与基因组百科全书通路富集分析。使用 PyMOL 等软件验证关键活性成分与核心靶点的分子对接。筛选出 262 种活性成分,其主要成分为槲皮素、山奈酚、白杨素、黄芩素和β-胡萝卜素。鉴定出 108 个疾病和药物的交集靶点,其主要成分为 RELA、FOS、STAT3、MAPK14、MAPK1、JUN 和 ESR1。基因本体论分析表明,关键靶点主要涉及对脂多糖的反应、对外源刺激物的反应和对营养水平的反应等生物学过程。京都基因与基因组百科全书分析结果表明,信号通路包括 AGE-RAGE 信号通路、IL-17 信号通路、TNF 信号通路和 Toll 样受体信号通路。分子对接表明,独活寄生汤的主要活性成分与治疗 OA 的关键靶点具有良好的结合活性。独活寄生汤通过多成分-多靶点-多通路的方式减轻免疫炎症反应,抑制软骨细胞凋亡,增强软骨细胞增殖修复,减少炎症反应,发挥治疗 OA 的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/755c/9771196/cb36ee14f61f/medi-101-e32132-g001.jpg

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