Guo Xinxin, Shen Weitao, Sun Mingjun, Lv Junjie, Liu Ran
Key Laboratory of Environmental Medicine Engineering, Ministry of Education, School of Public Health, Southeast University, Nanjing 210009, China.
Cancer Institute of Fudan University, Fudan University, Shanghai 200032, China.
J Oncol. 2023 Jan 4;2023:4211885. doi: 10.1155/2023/4211885. eCollection 2023.
Esophageal cancer (EC) had the sixth-highest mortality rate of all cancers due to its poor prognosis. Immune cells and mutation genes influenced the prognosis of EC, but their combined effect on predicting EC prognosis was unknown. In this study, we comprehensively analyzed the immune cell infiltration (ICI) and mutation genes and their combined effects for predicting prognosis in EC.
The CIBERSORT and ESTIMATE algorithms were used to analyse the ICI scape based on the TCGA and GEO databases. EC tissues and pathologic sections from Huai'an, China, were used to verify the key immune cells and mutation genes and their interactions.
Stromal/immune score patterns and ICI/gene had no statistical significance in overall survival (OS) ( > 0.05). The combination of ICI and tumor mutation burden (TMB) showed that the high TMB and high ICI score group had the shortest OS ( = 0.004). We recognized that the key mutation gene NRF2 was significantly different in the high/low ICI score subgroups ( = 0.002) and positivity with mast cells (MCs) ( < 0.05). Through experimental validation, we found that the MCs and activated mast cells (AC-MCs) were more infiltration in stage II/III ( = 0.032; = 0.013) of EC patients and that NRF2 expression was upregulated in EC ( = 0.045). AC-MCs combined with NRF2 had a poor prognosis, according to survival analysis ( = 0.056) and interactive analysis ( = 0.032).
We presume that NRF2 combined with AC-MCs could be a marker to predict prognosis and could influence immunotherapy through regulating PD-L1 in the EC.
食管癌(EC)因其预后较差,在所有癌症中死亡率排名第六。免疫细胞和突变基因影响EC的预后,但其对预测EC预后的联合作用尚不清楚。在本研究中,我们全面分析了免疫细胞浸润(ICI)和突变基因及其对预测EC预后的联合作用。
使用CIBERSORT和ESTIMATE算法基于TCGA和GEO数据库分析ICI情况。来自中国淮安的EC组织和病理切片用于验证关键免疫细胞和突变基因及其相互作用。
基质/免疫评分模式和ICI/基因在总生存期(OS)方面无统计学意义(>0.05)。ICI与肿瘤突变负荷(TMB)的联合分析显示,高TMB和高ICI评分组的OS最短(=0.004)。我们发现关键突变基因NRF2在高/低ICI评分亚组中有显著差异(=0.002),且与肥大细胞(MCs)呈阳性相关(<0.05)。通过实验验证,我们发现MCs和活化肥大细胞(AC-MCs)在EC患者的II/III期浸润更多(=0.032;=0.013),且NRF2在EC中表达上调(=0.045)。根据生存分析(=0.056)和交互分析(=0.032),AC-MCs与NRF2联合预后较差。
我们推测NRF2与AC-MCs联合可能是预测预后的标志物,并可能通过调节EC中的PD-L1影响免疫治疗。