GROW Research Laboratory, Narayana Nethralaya Foundation, Bangalore, 560099, India.
Gen-Eye Clinic, Narayana Nethralaya, Bangalore, 560099, India.
Graefes Arch Clin Exp Ophthalmol. 2023 Jul;261(7):2003-2017. doi: 10.1007/s00417-022-05955-5. Epub 2023 Jan 17.
Recent advances in sequencing technologies have enabled radical and rapid progress in the genetic diagnosis of inherited retinal disorders (IRDs). Although the list of gene variations continues to grow, it lacks the genetic etiology of ethnic groups like South Asians. Differences in racial backgrounds and consanguinity add to genetic heterogeneity and phenotypic overlaps.
This retrospective study includes documented data from the Gen-Eye clinic from years 2014 to 2019. Medical records and pedigrees of 591 IRD patients of Indian origin and genetic reports of 117 probands were reviewed. Genotype-phenotype correlations were performed to classify as correlating, non-correlating and unsolved cases.
Among the 591 patients, we observed a higher prevalence of clinically diagnosed retinitis pigmentosa (38.9%) followed by unspecified diagnoses (28.5%). Consanguinity was reported to be high (55.6%) in this cohort. Among the variants identified in 117 probands, 36.4% of variants were pathogenic, 19.2% were likely pathogenic, and 44.4% were of uncertain significance. Among the pathogenic and likely pathogenic variants, autosomal recessive inheritance showed higher prevalence. About 35% (41/117) of cases showed genotype-phenotype correlation. Within the correlating cases, retinitis pigmentosa and Stargardt disease were predominant. Novel variants identified in RP, Stargardt, and LCA are reported here.
This first-of-a-kind report on an Indian cohort contributes to existing knowledge and expansion of variant databases, presenting relevant and plausible novel variants. Phenotypic overlap and variability lead to a differential diagnosis and hence a clear genotype-phenotype correlation helps in precise clinical confirmation. The study also emphasizes the importance of genetic counselling and testing for personalized vision care in a tertiary eye hospital.
测序技术的最新进展使得遗传性视网膜疾病(IRDs)的基因诊断取得了重大而迅速的进展。尽管基因变异的清单不断增加,但它缺乏南亚等族裔的遗传病因。种族背景和近亲结婚的差异增加了遗传异质性和表型重叠。
本回顾性研究纳入了 2014 年至 2019 年期间 Gen-Eye 诊所的记录数据。对 591 名印度裔 IRD 患者的病历和家系以及 117 名先证者的遗传报告进行了回顾。进行了基因型-表型相关性分析,以将病例分为相关、不相关和未解决的病例。
在 591 名患者中,我们观察到临床上诊断为色素性视网膜炎(38.9%)的患病率较高,其次是未明确诊断(28.5%)。该队列报告近亲结婚率较高(55.6%)。在 117 名先证者中确定的变异体中,36.4%的变异体为致病性的,19.2%为可能致病性的,44.4%为意义不明的。在致病性和可能致病性变异体中,常染色体隐性遗传的患病率较高。约 35%(41/117)的病例显示基因型-表型相关性。在相关病例中,色素性视网膜炎和斯塔加特病较为常见。本研究报告了 RP、斯塔加特病和 LCA 中发现的新变异体。
这是首个针对印度人群的报告,为现有知识和变异体数据库的扩展做出了贡献,提出了相关和合理的新变异体。表型重叠和变异性导致了不同的诊断,因此明确的基因型-表型相关性有助于精确的临床确认。该研究还强调了遗传咨询和测试在三级眼科医院进行个性化视力保健的重要性。