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泰国急性肝胰腺坏死病暴发期间分离出的副溶血性弧菌PSU5579的基因组序列草图

Draft Genome Sequence of Vibrio parahaemolyticus PSU5579, Isolated during an Outbreak of Acute Hepatopancreatic Necrosis Disease in Thailand.

作者信息

LaPorte Jason P, Spinard Edward J, Cavanagh Damian, Gomez-Chiarri Marta, Rowley David C, Mekalanos John J, Mittraparp-Arthorn Pimonsri, Nelson David R

机构信息

Department of Cell and Molecular Biology, University of Rhode Island, Kingston, Rhode Island, USA.

Department of Fisheries, Animal and Veterinary Sciences, University of Rhode Island, Kingston, Rhode Island, USA.

出版信息

Microbiol Resour Announc. 2023 Feb 16;12(2):e0087322. doi: 10.1128/mra.00873-22. Epub 2023 Jan 19.

DOI:10.1128/mra.00873-22
PMID:36656017
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9933731/
Abstract

Here, we announce the draft genome sequence of Vibrio parahaemolyticus strain PSU5579, isolated from a shrimp hatchery in southern Thailand during an outbreak of acute hepatopancreatic necrosis disease (AHPND). The genome contains 44 contigs with a sequence length of 5,229,426 bp, 4,861 coding sequences, and a G+C content of 45.3%.

摘要

在此，我们公布副溶血性弧菌PSU5579菌株的基因组序列草图，该菌株是在泰国南部一家对虾孵化场爆发急性肝胰腺坏死病（AHPND）期间分离得到的。该基因组包含44个重叠群，序列长度为5,229,426 bp，有4,861个编码序列，G+C含量为45.3%。

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Rev Sci Tech. 2019 Sep;38(2):477-490. doi: 10.20506/rst.38.2.2999.
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A modular effector with a DNase domain and a marker for T6SS substrates.具有 DNase 结构域和 T6SS 底物标记的模块化效应器。
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3
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Dis Aquat Organ. 2017 May 11;124(3):223-232. doi: 10.3354/dao03120.
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Appl Environ Microbiol. 2017 Jun 16;83(13). doi: 10.1128/AEM.00737-17. Print 2017 Jul 1.
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The opportunistic marine pathogen Vibrio parahaemolyticus becomes virulent by acquiring a plasmid that expresses a deadly toxin.机会性海洋病原体副溶血性弧菌通过获得一个表达致命毒素的质粒而变得具有毒性。
Proc Natl Acad Sci U S A. 2015 Aug 25;112(34):10798-803. doi: 10.1073/pnas.1503129112. Epub 2015 Aug 10.
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Photorhabdus insect-related (Pir) toxin-like genes in a plasmid of Vibrio parahaemolyticus, the causative agent of acute hepatopancreatic necrosis disease (AHPND) of shrimp.副溶血性弧菌（虾急性肝胰腺坏死病（AHPND）的病原体）质粒中与昆虫相关的发光杆菌（Pir）毒素样基因。
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