Glyakina Anna V, Galzitskaya Oxana V
Institute of Protein Research, Russian Academy of Sciences, Pushchino, Russia.
Institute of Mathematical Problems of Biology RAS, Keldysh Institute of Applied Mathematics, Russian Academy of Sciences, Pushchino, Russia.
Biophys Rev. 2022 Dec 13;14(6):1527-1538. doi: 10.1007/s12551-022-01027-4. eCollection 2022 Dec.
In this work, we analyzed 78 mutations in the actin protein that cause the disease nemaline myopathy. We analyzed how these mutations are distributed in important regions of the actin molecule (folding nucleus, core of the filament, amyloidogenic regions, disordered regions, regions involved in interaction with other proteins). It was found that 54 mutations (43 residues) fall into the folding nucleus ( ≥ 0.5), 11 mutations (10 residues) into the filament core, 14 mutations into the amyloidogenic regions (11 residues), 14 mutations (9 residues) in the unstructured regions, and 24 mutations (22 residues) in regions involved in interaction with other proteins. It was also found that the occurrence of single mutations G44V, V45F, T68I, P72R, K338I and S350L leads to the appearance of new amyloidogenic regions that are not present in native actin. The largest number of mutations (54 out of 78) occurs in the folding nucleus; these mutations are important for folding and therefore can affect the protein folding rate. We have shown that almost all of the considered mutations are associated with the structural characteristics of the actin molecule, and some of the residues we have considered have several important characteristics.
在这项工作中,我们分析了肌动蛋白中导致杆状体肌病的78个突变。我们分析了这些突变如何分布在肌动蛋白分子的重要区域(折叠核、细丝核心、淀粉样变区域、无序区域、与其他蛋白质相互作用的区域)。结果发现,54个突变(43个残基)位于折叠核(≥0.5),11个突变(10个残基)位于细丝核心,14个突变位于淀粉样变区域(11个残基),14个突变(9个残基)位于非结构化区域,24个突变(22个残基)位于与其他蛋白质相互作用的区域。还发现,单突变G44V、V45F、T68I、P72R、K338I和S350L的出现导致了天然肌动蛋白中不存在的新淀粉样变区域的出现。最大数量的突变(78个中的54个)发生在折叠核中;这些突变对折叠很重要,因此会影响蛋白质的折叠速率。我们已经表明,几乎所有考虑的突变都与肌动蛋白分子的结构特征相关,并且我们考虑的一些残基具有几个重要特征。