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一个蛋白质组学数据集,记录了细胞暴露于杀真菌剂、佐剂和杀真菌剂配方后髓细胞的反应。

A proteomics dataset capturing myeloid cell responses upon cellular exposure to fungicides, adjuvants and fungicide formulations.

作者信息

de Ávila Renato Ivan, Carreira Santos Sofía, Siino Valentina, Levander Fredrik, Lindstedt Malin, Zeller Kathrin S

机构信息

Department of Immunotechnology, Lund University, Medicon Village, building 406, Lund 22387, Sweden.

出版信息

Data Brief. 2023 Jan 4;46:108878. doi: 10.1016/j.dib.2022.108878. eCollection 2023 Feb.

Abstract

Dendritic cells are the sentinels of the immune system, linking the innate and adaptive immune response. Myeloid and dendritic cell models have been successfully used in approaches to predict adverse outcomes such as skin sensitization. We here exposed a well-characterized human dendritic cell-like cell line to agricultural chemicals, including fungicide formulations, active ingredients, adjuvants and defined mixtures for 24 h to profile induced changes on protein levels. Cell pellets were harvested and prepared for bottom-up label-free analysis with peptide separation on an EASY-nano LC system 1200 coupled online with a QExactive HF-X mass spectrometer with data-dependent acquisition (DDA). The raw data files and processed quantitative data have been deposited to ProteomeXchange with the data identification number PXD034624 and are described here. The data in this article may serve as a resource for researchers interested in e.g. human toxicology, immunology, cell biology and pharmacology.

摘要

树突状细胞是免疫系统的哨兵,连接着先天性免疫反应和适应性免疫反应。髓样和树突状细胞模型已成功用于预测皮肤致敏等不良后果的方法中。我们在此将一种特征明确的人树突状细胞样细胞系暴露于农用化学品中,包括杀真菌剂配方、活性成分、佐剂和特定混合物24小时,以分析蛋白质水平上的诱导变化。收获细胞沉淀并准备用于自下而上的无标记分析,在EASY-nano LC系统1200上进行肽分离,并与具有数据依赖采集(DDA)的QExactive HF-X质谱仪在线联用。原始数据文件和处理后的定量数据已存入ProteomeXchange,数据识别号为PXD034624,并在此处进行描述。本文中的数据可为对例如人类毒理学、免疫学、细胞生物学和药理学感兴趣的研究人员提供资源。

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