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鉴定一种针对 SARS-CoV-2 刺突蛋白的短 ACE2 衍生订书肽。

Identification of a short ACE2-derived stapled peptide targeting the SARS-CoV-2 spike protein.

机构信息

Department of Chemistry "Ugo Schiff", University of Florence, Via della Lastruccia 13, 50019, Sesto Fiorentino, Florence, Italy.

General Laboratory, Careggi University Hospital, Largo Brambilla 3, 50134, Florence, Italy.

出版信息

Eur J Med Chem. 2023 Mar 5;249:115118. doi: 10.1016/j.ejmech.2023.115118. Epub 2023 Jan 17.

Abstract

The design and synthesis of a series of peptide derivatives based on a short ACE2 α-helix 1 epitope and subsequent [i - i+4] stapling of the secondary structure resulted in the identification of a 9-mer peptide capable to compete with recombinant ACE2 towards Spike RBD in the micromolar range. Specifically, SARS-CoV-2 Spike inhibitor screening based on colorimetric ELISA assay and structural studies by circular dichroism showed the ring-closing metathesis cyclization being capable to stabilize the helical structure of the 9-mer HEAEDLFYQ epitope better than the triazole stapling via click chemistry. MD simulations showed the stapled peptide being able not only to bind the Spike RBD, sterically interfering with ACE2, but also showing higher affinity to the target as compared to parent epitope.

摘要

基于一段 ACE2α-螺旋 1 表位设计并合成了一系列肽衍生物,随后对二级结构进行 [i-i+4] 订书钉化,鉴定出一种能够在微摩尔范围内与 Spike RBD 竞争的 9 肽。具体而言,基于比色 ELISA 测定法的 SARS-CoV-2 Spike 抑制剂筛选和圆二色性的结构研究表明,闭环复分解环化能够比点击化学的三唑订书钉更好地稳定 9 肽 HEAEDLFYQ 表位的螺旋结构。MD 模拟表明,订书钉肽不仅能够结合 Spike RBD,在空间上干扰 ACE2,而且与母体表位相比,对靶标具有更高的亲和力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5639/9842534/ac75b681a85b/ga1_lrg.jpg

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