Institute of Virology and Immunology, Bern, Switzerland.
Department of Infectious Diseases and Pathobiology, Vetsuisse Faculty, University of Bern, Bern, Switzerland.
Front Immunol. 2023 Jan 6;13:1099357. doi: 10.3389/fimmu.2022.1099357. eCollection 2022.
Dendritic and monocytic cells co-operate to initiate and shape adaptive immune responses in secondary lymphoid tissue. The complexity of this system is poorly understood, also because of the high phenotypic and functional plasticity of monocytic cells. We have sequenced mononuclear phagocytes in mesenteric lymph nodes (LN) of three adult cows at the single-cell level, revealing ten dendritic-cell (DC) clusters and seven monocyte/macrophage clusters with clearly distinct transcriptomic profiles. Among DC, we defined LN-resident subsets and their progenitors, as well as subsets of highly activated migratory DC differing in transcript levels for T-cell attracting chemokines. Our analyses also revealed a potential differentiation path for cDC2, resulting in a cluster of inflammatory cDC2 with close transcriptional similarity to putative DC3 and monocyte-derived DC. Monocytes and macrophages displayed sub-clustering mainly driven by pro- or anti-inflammatory expression signatures, including a small cluster of cycling, presumably self-renewing, macrophages. With this transcriptomic snapshot of LN-derived mononuclear phagocytes, we reveal functional properties and differentiation trajectories in a "command center of immunity", and identify elements that are conserved across species.
树突状细胞和单核细胞协同作用,在次级淋巴组织中启动和塑造适应性免疫反应。由于单核细胞的表型和功能高度可塑性,该系统的复杂性尚未被充分理解。我们在三个成年奶牛的肠系膜淋巴结(LN)中进行了单核细胞的单细胞测序,揭示了十个树突状细胞(DC)簇和七个单核细胞/巨噬细胞簇,具有明显不同的转录组特征。在 DC 中,我们定义了 LN 驻留亚群及其前体细胞,以及高度激活的迁移 DC 亚群,这些亚群在吸引 T 细胞的趋化因子的转录水平上存在差异。我们的分析还揭示了 cDC2 的潜在分化途径,导致一群具有炎症表型的 cDC2,与假定的 DC3 和单核细胞衍生的 DC 具有密切的转录相似性。单核细胞和巨噬细胞的亚聚类主要由促炎或抗炎表达特征驱动,包括一小群循环的、推测为自我更新的巨噬细胞。通过对 LN 来源的单核吞噬细胞的转录组快照分析,我们揭示了“免疫指挥中心”中的功能特性和分化轨迹,并鉴定了跨物种保守的元素。