• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

使用可调片段描述符预测高对映选择性催化剂。

Predicting Highly Enantioselective Catalysts Using Tunable Fragment Descriptors.

作者信息

Tsuji Nobuya, Sidorov Pavel, Zhu Chendan, Nagata Yuuya, Gimadiev Timur, Varnek Alexandre, List Benjamin

机构信息

Institute for Chemical Reaction Design and Discovery (WPI-ICReDD), Hokkaido University, Sapporo, 001-0021, Japan.

Max-Planck-Institut für Kohlenforschung, 45470, Mülheim an der Ruhr, Germany.

出版信息

Angew Chem Int Ed Engl. 2023 Mar 6;62(11):e202218659. doi: 10.1002/anie.202218659. Epub 2023 Feb 6.

DOI:10.1002/anie.202218659
PMID:36688354
Abstract

Catalyst optimization processes typically rely on inductive and qualitative assumptions of chemists based on screening data. While machine learning models using molecular properties or calculated 3D structures enable quantitative data evaluation, costly quantum chemical calculations are often required. In contrast, readily available binary fingerprint descriptors are time- and cost-efficient, but their predictive performance remains insufficient. Here, we describe a machine learning model based on fragment descriptors, which are fine-tuned for asymmetric catalysis and represent cyclic or polyaromatic hydrocarbons, enabling robust and efficient virtual screening. Using training data with only moderate selectivities, we designed theoretically and validated experimentally new catalysts showing higher selectivities in a challenging asymmetric tetrahydropyran synthesis.

摘要

催化剂优化过程通常依赖于化学家基于筛选数据的归纳和定性假设。虽然使用分子性质或计算得到的3D结构的机器学习模型能够进行定量数据评估,但通常需要昂贵的量子化学计算。相比之下,易于获得的二元指纹描述符既节省时间又成本效益高,但其预测性能仍然不足。在这里,我们描述了一种基于片段描述符的机器学习模型,该模型针对不对称催化进行了微调,代表环状或多环芳烃,能够实现强大而高效的虚拟筛选。我们使用选择性仅为中等的训练数据,从理论上设计并通过实验验证了在具有挑战性的不对称四氢吡喃合成中表现出更高选择性的新型催化剂。

相似文献

1
Predicting Highly Enantioselective Catalysts Using Tunable Fragment Descriptors.使用可调片段描述符预测高对映选择性催化剂。
Angew Chem Int Ed Engl. 2023 Mar 6;62(11):e202218659. doi: 10.1002/anie.202218659. Epub 2023 Feb 6.
2
The List-Varnek Collaboration at the Institute of Chemical Reaction Design and Discovery (ICReDD).化学反应设计与发现研究所(ICReDD)的利斯特 - 瓦尔内克合作团队。
Angew Chem Int Ed Engl. 2023 Aug 14;62(33):e202306925. doi: 10.1002/anie.202306925. Epub 2023 Jun 23.
3
Molecular Machine Learning for Chemical Catalysis: Prospects and Challenges.分子机器学习在化学催化中的应用:前景与挑战。
Acc Chem Res. 2023 Feb 7;56(3):402-412. doi: 10.1021/acs.accounts.2c00801. Epub 2023 Jan 30.
4
A Primer on 2D Descriptors in Selectivity Modeling for Asymmetric Catalysis.不对称催化选择性建模中的二维描述符入门
Chemistry. 2024 Feb 16;30(10):e202302837. doi: 10.1002/chem.202302837. Epub 2023 Dec 19.
5
Importance of Engineered and Learned Molecular Representations in Predicting Organic Reactivity, Selectivity, and Chemical Properties.在预测有机反应性、选择性和化学性质方面,工程化和学习的分子表示的重要性。
Acc Chem Res. 2021 Feb 16;54(4):827-836. doi: 10.1021/acs.accounts.0c00745. Epub 2021 Feb 3.
6
Dreams, False Starts, Dead Ends, and Redemption: A Chronicle of the Evolution of a Chemoinformatic Workflow for the Optimization of Enantioselective Catalysts.梦想、失败、挫折与救赎:手性催化剂优化的计算化学工作流程的演进历程。
Acc Chem Res. 2021 May 4;54(9):2041-2054. doi: 10.1021/acs.accounts.0c00826. Epub 2021 Apr 15.
7
Catalysing (organo-)catalysis: Trends in the application of machine learning to enantioselective organocatalysis.催化(有机)催化:机器学习在对映选择性有机催化中的应用趋势
Beilstein J Org Chem. 2024 Sep 10;20:2280-2304. doi: 10.3762/bjoc.20.196. eCollection 2024.
8
Design, Synthesis, and Application of Chiral Bicyclic Imidazole Catalysts.手性双环咪唑催化剂的设计、合成与应用。
Acc Chem Res. 2022 Sep 20;55(18):2708-2727. doi: 10.1021/acs.accounts.2c00455. Epub 2022 Aug 31.
9
Mechanistically driven development of iridium catalysts for asymmetric allylic substitution.基于机理的手性铱催化剂在不对称烯丙基取代反应中的发展。
Acc Chem Res. 2010 Dec 21;43(12):1461-75. doi: 10.1021/ar100047x. Epub 2010 Sep 28.
10
Probing machine learning models based on high throughput experimentation data for the discovery of asymmetric hydrogenation catalysts.基于高通量实验数据探索机器学习模型以发现不对称氢化催化剂。
Chem Sci. 2024 Jul 16;15(34):13618-13630. doi: 10.1039/d4sc03647f. eCollection 2024 Aug 28.

引用本文的文献

1
In Search of the Perfect Composite Material-A Chemoinformatics Approach Towards the Easier Handling of Dental Materials.寻找完美的复合材料——一种用于更轻松处理牙科材料的化学信息学方法。
Int J Mol Sci. 2025 Aug 26;26(17):8283. doi: 10.3390/ijms26178283.
2
Predictive modeling of visible-light azo-photoswitches' properties using structural features.利用结构特征对可见光偶氮光开关的性质进行预测建模。
J Cheminform. 2025 Apr 1;17(1):42. doi: 10.1186/s13321-025-00993-7.
3
Understanding Conformation Importance in Data-Driven Property Prediction Models.
理解构象在数据驱动的性质预测模型中的重要性。
J Chem Inf Model. 2025 Apr 14;65(7):3388-3404. doi: 10.1021/acs.jcim.5c00018. Epub 2025 Mar 18.
4
Homogeneous catalyst graph neural network: A human-interpretable graph neural network tool for ligand optimization in asymmetric catalysis.均相催化剂图神经网络:一种用于不对称催化中配体优化的可人工解释的图神经网络工具。
iScience. 2025 Jan 23;28(3):111881. doi: 10.1016/j.isci.2025.111881. eCollection 2025 Mar 21.
5
Connecting the complexity of stereoselective synthesis to the evolution of predictive tools.将立体选择性合成的复杂性与预测工具的发展联系起来。
Chem Sci. 2025 Jan 23;16(9):3832-3851. doi: 10.1039/d4sc07461k. eCollection 2025 Feb 26.
6
Catalysing (organo-)catalysis: Trends in the application of machine learning to enantioselective organocatalysis.催化(有机)催化:机器学习在对映选择性有机催化中的应用趋势
Beilstein J Org Chem. 2024 Sep 10;20:2280-2304. doi: 10.3762/bjoc.20.196. eCollection 2024.
7
POxload: Machine Learning Estimates Drug Loadings of Polymeric Micelles.POxload:用于估算聚合物胶束药物载量的机器学习方法。
Mol Pharm. 2024 Jul 1;21(7):3356-3374. doi: 10.1021/acs.molpharmaceut.4c00086. Epub 2024 May 28.
8
Valence-isomer selective cycloaddition reaction of cycloheptatrienes-norcaradienes.环庚三烯-降蒈二烯的价异构体选择性环加成反应
Nat Commun. 2024 Mar 14;15(1):2309. doi: 10.1038/s41467-024-46523-1.
9
A genetic optimization strategy with generality in asymmetric organocatalysis as a primary target.一种以不对称有机催化为主要目标的具有通用性的遗传优化策略。
Chem Sci. 2024 Jan 31;15(10):3640-3660. doi: 10.1039/d3sc06208b. eCollection 2024 Mar 6.
10
OSPAR: A Corpus for Extraction of Organic Synthesis Procedures with Argument Roles.OSPAR:用于提取具有论元角色的有机合成过程的语料库。
J Chem Inf Model. 2023 Nov 13;63(21):6619-6628. doi: 10.1021/acs.jcim.3c01449. Epub 2023 Oct 19.