• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

研究环状拓扑结构对用于降解聚对苯二甲酸乙二醇酯的塑料降解酶性能的影响。

Investigating the effects of cyclic topology on the performance of a plastic degrading enzyme for polyethylene terephthalate degradation.

机构信息

School of Chemistry, Cardiff University Main Building, Park Place, Cardiff, CF10 3AT, UK.

Cardiff Catalysis Institute, Cardiff University Main Building, Park Place, Cardiff, CF10 3AT, UK.

出版信息

Sci Rep. 2023 Jan 23;13(1):1267. doi: 10.1038/s41598-023-27780-4.

DOI:10.1038/s41598-023-27780-4
PMID:36690710
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9870871/
Abstract

Agitation is a commonly encountered stress for enzymes during all stages of production and application, but investigations that aim to improve their tolerance using topological engineering have yet to be reported. Here, the plastic-degrading enzyme IsPETase was cyclized in a range of topologies including a cyclic monomer, cyclic dimer and catenane using SpyTag/SpyCatcher technologies, and their tolerance towards different stresses including mechanical agitation was investigated. The cyclic dimer and catenane topologies were less susceptible to agitation-induced inactivation resulting in enhancement of polyethylene terephthalate (PET) degradation. While contrary to conventional belief, cyclic topologies did not improve tolerance of IsPETase towards heat or proteolytic treatment, the close proximity of active sites in the dimeric and catenane variants was found to enhance PET conversion into small soluble products. Together, these findings illustrate that it is worthwhile to explore the topology engineering of enzymes used in heterogeneous catalysis as it improves factors that are often overlooked in homogeneous catalysis studies.

摘要

在生产和应用的各个阶段,酶都会经常遇到应激,即搅动,但目前还没有利用拓扑工程来提高其耐受性的研究。在这里,使用 SpyTag/SpyCatcher 技术,将可降解塑料的酶 IsPETase 环化,形成多种拓扑结构,包括环状单体、环状二聚体和索烃,并研究它们对包括机械搅拌在内的不同应激的耐受性。环状二聚体和索烃结构不易受到搅动引起的失活影响,从而增强了对聚对苯二甲酸乙二醇酯(PET)的降解。与传统观点相反,环状拓扑结构并没有提高 IsPETase 对热或蛋白水解处理的耐受性,但发现二聚体和索烃变体中活性位点的紧密接近会增强 PET 转化为小的可溶性产物。总之,这些发现表明,探索用于多相催化的酶的拓扑工程是值得的,因为它可以改善在均相催化研究中经常被忽视的因素。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0780/9870871/73d114c731fd/41598_2023_27780_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0780/9870871/d007e359c157/41598_2023_27780_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0780/9870871/bb8fb57f9c71/41598_2023_27780_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0780/9870871/10446abf30db/41598_2023_27780_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0780/9870871/2b65d7f4e520/41598_2023_27780_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0780/9870871/c62da6b20654/41598_2023_27780_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0780/9870871/391412cb6355/41598_2023_27780_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0780/9870871/4fb19ade7ee8/41598_2023_27780_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0780/9870871/73d114c731fd/41598_2023_27780_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0780/9870871/d007e359c157/41598_2023_27780_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0780/9870871/bb8fb57f9c71/41598_2023_27780_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0780/9870871/10446abf30db/41598_2023_27780_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0780/9870871/2b65d7f4e520/41598_2023_27780_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0780/9870871/c62da6b20654/41598_2023_27780_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0780/9870871/391412cb6355/41598_2023_27780_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0780/9870871/4fb19ade7ee8/41598_2023_27780_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0780/9870871/73d114c731fd/41598_2023_27780_Fig8_HTML.jpg

相似文献

1
Investigating the effects of cyclic topology on the performance of a plastic degrading enzyme for polyethylene terephthalate degradation.研究环状拓扑结构对用于降解聚对苯二甲酸乙二醇酯的塑料降解酶性能的影响。
Sci Rep. 2023 Jan 23;13(1):1267. doi: 10.1038/s41598-023-27780-4.
2
[Advances in poly(ethylene terephthalate) hydrolases].[聚对苯二甲酸乙二酯水解酶的研究进展]
Sheng Wu Gong Cheng Xue Bao. 2023 May 25;39(5):1998-2014. doi: 10.13345/j.cjb.220915.
3
Structural insight and engineering of a plastic degrading hydrolase Ple629.结构洞察与可塑降解水解酶 Ple629 的工程改造。
Biochem Biophys Res Commun. 2022 Oct 20;626:100-106. doi: 10.1016/j.bbrc.2022.07.103. Epub 2022 Aug 6.
4
Analysis of Poly(ethylene terephthalate) degradation kinetics of evolved IsPETase variants using a surface crowding model.用表面拥挤模型分析进化的 IsPETase 变体的聚对苯二甲酸乙二酯降解动力学。
J Biol Chem. 2024 Mar;300(3):105783. doi: 10.1016/j.jbc.2024.105783. Epub 2024 Feb 22.
5
Towards synthetic PETtrophy: Engineering Pseudomonas putida for concurrent polyethylene terephthalate (PET) monomer metabolism and PET hydrolase expression.迈向合成 PETtrophy:工程假单胞菌以同时代谢聚对苯二甲酸乙二醇酯 (PET) 单体和表达 PET 水解酶。
Microb Cell Fact. 2022 Jun 18;21(1):119. doi: 10.1186/s12934-022-01849-7.
6
Enhancement of the degradation capacity of IsPETase for PET plastic degradation by protein engineering.通过蛋白质工程增强 IsPETase 对 PET 塑料的降解能力。
Sci Total Environ. 2022 Aug 15;834:154947. doi: 10.1016/j.scitotenv.2022.154947. Epub 2022 Mar 30.
7
Computation-Based Design of Salt Bridges in PETase for Enhanced Thermostability and Performance for PET Degradation.基于计算的 PETase 盐桥设计,以增强耐热性和 PET 降解性能。
Chembiochem. 2023 Nov 2;24(21):e202300373. doi: 10.1002/cbic.202300373. Epub 2023 Sep 13.
8
Structural and functional characterization of polyethylene terephthalate hydrolase from Ideonella sakaiensis.聚对苯二甲酸乙二醇酯水解酶的结构与功能表征。
Biochem Biophys Res Commun. 2019 Jan 1;508(1):289-294. doi: 10.1016/j.bbrc.2018.11.148. Epub 2018 Nov 27.
9
Rational redesign of thermophilic PET hydrolase LCCICCG to enhance hydrolysis of high crystallinity polyethylene terephthalates.理性设计嗜热 PET 水解酶 LCCICCG 以增强对高结晶度聚对苯二甲酸乙二醇酯的水解。
J Hazard Mater. 2023 Jul 5;453:131386. doi: 10.1016/j.jhazmat.2023.131386. Epub 2023 Apr 7.
10
Improving plastic degrading enzymes via directed evolution.通过定向进化提高塑料降解酶的性能。
Protein Eng Des Sel. 2024 Jan 29;37. doi: 10.1093/protein/gzae009.

引用本文的文献

1
Integration of pH Control into Chi.Bio Reactors and Demonstration with Small-Scale Enzymatic Poly(ethylene terephthalate) Hydrolysis.将 pH 控制集成到 Chi.Bio 反应器中,并通过小规模酶法聚对苯二甲酸乙二醇酯水解进行验证。
Biochemistry. 2024 Jul 2;63(13):1599-1607. doi: 10.1021/acs.biochem.4c00149. Epub 2024 Jun 22.

本文引用的文献

1
Machine learning-aided engineering of hydrolases for PET depolymerization.基于机器学习的 PET 解聚用水解酶工程。
Nature. 2022 Apr;604(7907):662-667. doi: 10.1038/s41586-022-04599-z. Epub 2022 Apr 27.
2
Engineering and evaluation of thermostable PETase variants for PET degradation.用于聚对苯二甲酸乙二酯(PET)降解的热稳定PET水解酶变体的工程设计与评估
Eng Life Sci. 2021 Nov 29;22(3-4):192-203. doi: 10.1002/elsc.202100105. eCollection 2022 Mar.
3
Mechanism-Based Design of Efficient PET Hydrolases.基于机制的高效PET水解酶设计。
ACS Catal. 2022 Mar 18;12(6):3382-3396. doi: 10.1021/acscatal.1c05856. Epub 2022 Feb 28.
4
Adsorption of enzymes with hydrolytic activity on polyethylene terephthalate.具有水解活性的酶在聚对苯二甲酸乙二醇酯上的吸附。
Enzyme Microb Technol. 2021 Dec;152:109937. doi: 10.1016/j.enzmictec.2021.109937. Epub 2021 Oct 30.
5
A comprehensive and critical review on key elements to implement enzymatic PET depolymerization for recycling purposes.全面且批判性地回顾了实现酶促 PET 解聚以实现回收目的的关键要素。
Biotechnol Adv. 2021 Nov 15;52:107811. doi: 10.1016/j.biotechadv.2021.107811. Epub 2021 Jul 29.
6
Effect of backbone circularization on colloidal stability: Compaction of unfolded structures improves aggregation resistance of granulocyte colony-stimulating factor.环状骨架对胶体稳定性的影响:未折叠结构的紧凑化提高了粒细胞集落刺激因子的抗聚集能力。
Int J Pharm. 2021 Aug 10;605:120774. doi: 10.1016/j.ijpharm.2021.120774. Epub 2021 Jun 9.
7
Plastic wastes biodegradation: Mechanisms, challenges and future prospects.塑料废物生物降解:机制、挑战与展望。
Sci Total Environ. 2021 Aug 1;780:146590. doi: 10.1016/j.scitotenv.2021.146590. Epub 2021 Mar 19.
8
Approaches for peptide and protein cyclisation.肽和蛋白质环化方法。
Org Biomol Chem. 2021 May 12;19(18):3983-4001. doi: 10.1039/d1ob00411e.
9
An absorbance method for analysis of enzymatic degradation kinetics of poly(ethylene terephthalate) films.一种用于分析聚对苯二甲酸乙二醇酯薄膜酶降解动力学的吸光度法。
Sci Rep. 2021 Jan 13;11(1):928. doi: 10.1038/s41598-020-79031-5.
10
Topology engineering via protein catenane construction to strengthen an industrial biocatalyst.通过蛋白质索烃的构建进行拓扑工程以强化工业生物催化剂。
J Biotechnol. 2021 Jan 10;325:271-279. doi: 10.1016/j.jbiotec.2020.10.012. Epub 2020 Oct 13.