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肉桂酸衍生物与咪唑/苯并咪唑连接物作为细胞色素 P45051 抑制剂的合成、表征、分子动力学模拟和生物评价。

Synthesis, characterization, molecular dynamic simulation, and biological assessment of cinnamates linked to imidazole/benzimidazole as a CYP51 inhibitor.

机构信息

Department of Chemistry, S.V. National Institute of Technology, Surat, India.

Microcare Laboratory, Surat, India.

出版信息

J Biomol Struct Dyn. 2023;41(21):11518-11534. doi: 10.1080/07391102.2023.2170918. Epub 2023 Jan 24.


DOI:10.1080/07391102.2023.2170918
PMID:36691770
Abstract

A class of 2-(1-imidazol-1-yl)-1-phenylethyl cinnamates and 2-(1-benzo[]imidazol-1-yl)-1-phenylethyl cinnamates were synthesized, and their synthesis was validated using various spectroscopic techniques like IR, NMR, and Mass spectrometry. In addition, the compounds were assessed for antibacterial against gram-positive and gram-negative strains and antifungal against six different fungal strains. Compounds , , , and exhibited significant activity against all bacterial strains ranging from and compounds , , and exhibited considerable activity against all fungal strains ranging from . A molecular docking study indicated that compounds and could be lodged in the active pocket and inhibit Sterol 14α-demethylase (CYP51) protein via various interactions, and these studies validate the antifungal results. Different parameters from the 100 ns MD simulation study are investigated to evaluate the dynamic stability of protein-ligand complexes. According to the MD simulation study, the proposed compounds effectively kept their molecular interaction and structural integrity within the Sterol 14-demethylase. Compounds , , and are promising lead compounds in searching for novel antifungal drug-like molecules. Furthermore, ADME indicates that these compounds possess drug-like physicochemical properties to be orally bioavailable.Communicated by Ramaswamy H. Sarma.

摘要

一类 2-(1-咪唑-1-基)-1-苯基乙基肉桂酸酯和 2-(1-苯并咪唑-1-基)-1-苯基乙基肉桂酸酯被合成,其合成使用各种光谱技术如红外、核磁和质谱进行了验证。此外,还评估了这些化合物对革兰氏阳性和革兰氏阴性菌株的抗菌活性以及对六种不同真菌菌株的抗真菌活性。化合物 、 、 、 对所有测试的细菌菌株均表现出显著的活性,活性范围为 ,而化合物 、 、 对所有测试的真菌菌株均表现出相当的活性,活性范围为 。分子对接研究表明,化合物 和 可以通过各种相互作用结合到活性口袋中并抑制甾醇 14α-去甲基酶(CYP51)蛋白,这些研究验证了抗真菌结果。从 100nsMD 模拟研究中研究了不同的参数,以评估蛋白-配体复合物的动态稳定性。根据 MD 模拟研究,所提出的化合物在甾醇 14-去甲基酶中有效地保持了其分子相互作用和结构完整性。化合物 、 、 是寻找新型抗真菌药物样分子的有前途的先导化合物。此外,ADME 表明这些化合物具有类药性的物理化学性质,可口服生物利用。由 Ramaswamy H. Sarma 传达。

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