Molecular Ecology and Evolution Bangor, School of Natural Sciences, Bangor University, Environment Centre Wales, Bangor, UK.
Fondation pour la Recherche sur la Biodiversité - Centre for the Synthesis and Analysis of Biodiversity, Institut Bouisson Bertrand, Montpellier, France.
Nat Ecol Evol. 2023 Mar;7(3):414-423. doi: 10.1038/s41559-022-01975-w. Epub 2023 Jan 26.
Phenotypic plasticity in ancestral populations is hypothesized to facilitate adaptation, but evidence is piecemeal and often contradictory. Further, whether ancestral plasticity increases the probability of parallel adaptive changes has not been explored. The most general finding is that ancestral responses to a new environment are reversed following adaptation (known as reversion). We investigated the contribution of ancestral plasticity to adaptive evolution of gene expression in two independently evolved lineages of zinc-tolerant Silene uniflora. We found that the general pattern of reversion is driven by the absence of a widespread stress response in zinc-adapted plants compared with zinc-sensitive plants. We show that ancestral plasticity that moves expression closer to the optimum value in the new environment influences the evolution of gene expression among genes that are likely to be involved in adaptation and increases the chance that genes are recruited repeatedly during adaptation. However, despite convergence in gene expression levels between independently adapted lineages, ancestral plasticity does not influence how similar expression values of adaptive genes become. Surprisingly, we also observed that ancestral plasticity that increases fitness often becomes genetically determined and fixed, that is, genetically assimilated. These results emphasize the important role of ancestral plasticity in parallel adaptation.
祖先种群的表型可塑性被假设为有助于适应,但证据零碎且常常相互矛盾。此外,祖先的可塑性是否增加了平行适应变化的可能性尚未得到探索。最普遍的发现是,在适应后,对新环境的祖先反应会发生逆转(称为反转)。我们研究了祖先可塑性对锌耐受矢车菊两个独立进化谱系中基因表达适应性进化的贡献。我们发现,与锌敏感植物相比,锌适应植物中广泛存在的应激反应缺失导致了反转的普遍模式。我们表明,在新环境中使表达更接近最佳值的祖先可塑性会影响可能参与适应的基因的表达进化,并增加在适应过程中基因被多次招募的机会。然而,尽管在独立适应的谱系之间观察到基因表达水平的趋同,但祖先的可塑性并不影响适应性基因的表达值变得多么相似。令人惊讶的是,我们还观察到,增加适应性的祖先可塑性通常会变得遗传决定并固定,即遗传同化。这些结果强调了祖先可塑性在平行适应中的重要作用。