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植物和细菌病原体中存在的、在乳糜泻和癌症中起作用的谷氨酸肽酶特性概述。

Overview of the Properties of Glutamic Peptidases That Are Present in Plant and Bacterial Pathogens and Play a Role in Celiac Disease and Cancer.

作者信息

Oda Kohei, Wlodawer Alexander

机构信息

Department of Applied Biology, Kyoto Institute of Technology, Matsugasaki, Sakyo-Ku, Kyoto 606-8585, Japan.

Center for Structural Biology, National Cancer Institute, Frederick, Maryland 21702, United States.

出版信息

Biochemistry. 2023 Feb 7;62(3):672-694. doi: 10.1021/acs.biochem.2c00622. Epub 2023 Jan 27.

Abstract

Seven peptidase (proteinase) families─aspartic, cysteine, metallo, serine, glutamic, threonine, and asparagine─are in the peptidase database MEROPS, version 12.4 (https://www.ebi.ac.uk/merops/). The glutamic peptidase family is assigned two clans, GA and GB, and comprises six subfamilies. This perspective summarizes the unique features of their representatives. (1) G1, scytalidoglutamic peptidase, has a β-sandwich structure containing catalytic residues glutamic acid (E) and glutamine (Q), thus the name eqolisin. Most family members are pepstatin-insensitive and act as plant pathogens. (2) G2, preneck appendage protein, originates in phages, is a transmembrane protein, and its catalytic residues consist of glutamic and aspartic acids. (3) G3, strawberry mottle virus glutamic peptidase, originates in viruses and has a β-sandwich structure with catalytic residues E and Q. Neprosin has propyl endopeptidase activity, is associated with celiac disease, has a β-sandwich structure, and contains catalytic residues E-E and Q-tryptophan. (4) G4, Tiki peptidase, of the erythromycin esterase family, is a transmembrane protein, and its catalytic residues are E-histidine pairs. (5) G5, RCE1 peptidase, is associated with cancer, is a transmembrane protein, and its catalytic residues are E-histidine and asparagine-histidine. Microcystinase, a bacterial toxin, is a transmembrane protein with catalytic residues E-histidine and asparagine-histidine. (6) G6, Ras/Rap1-specific peptidase, is a bacterial pathogen, a transmembrane protein, and its catalytic residues are E-histidine pairs. This family's common features are that their catalytic residues consist of a glutamic acid and another (variable) amino acid and that they exhibit a diversity of biological functions─plant and bacterial pathogens and involvement in celiac disease and cancer─that suggests they are viable drug targets.

摘要

在肽酶数据库MEROPS 12.4版(https://www.ebi.ac.uk/merops/)中,有七个肽酶(蛋白酶)家族,即天冬氨酸、半胱氨酸、金属、丝氨酸、谷氨酸、苏氨酸和天冬酰胺家族。谷氨酸肽酶家族被分为两个族,GA和GB,包含六个亚家族。本综述总结了其代表成员的独特特征。(1)G1,枝顶孢谷氨酸肽酶,具有β-折叠结构,包含催化残基谷氨酸(E)和谷氨酰胺(Q),因此得名equolisin。该家族大多数成员对胃蛋白酶抑制剂不敏感,且作为植物病原体起作用。(2)G2,前颈附属蛋白,起源于噬菌体,是一种跨膜蛋白,其催化残基由谷氨酸和天冬氨酸组成。(3)G3,草莓斑驳病毒谷氨酸肽酶,起源于病毒,具有β-折叠结构,催化残基为E和Q。内蛋白酶有丙基内肽酶活性,与乳糜泻有关,具有β-折叠结构,包含催化残基E-E和Q-色氨酸。(4)G4,红霉素酯酶家族的提基肽酶,是一种跨膜蛋白,其催化残基是E-组氨酸对。(5)G5,RCE1肽酶,与癌症有关,是一种跨膜蛋白,其催化残基是E-组氨酸和天冬酰胺-组氨酸。微囊藻毒素酶,一种细菌毒素蛋白,是一种跨膜蛋白,催化残基是E-组氨酸和天冬酰胺-组氨酸。(6)G6,Ras/Rap1特异性肽酶,是一种细菌病原体,是一种跨膜蛋白,其催化残基是E-组氨酸对。该家族的共同特征是其催化残基由一个谷氨酸和另一个(可变)氨基酸组成,并且它们具有多种生物学功能,如植物和细菌病原体以及参与乳糜泻和癌症,这表明它们是可行的药物靶点。

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