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耻垢分枝杆菌中依赖F的氧化还原酶B(FDOR-B)催化的不对称烯还原反应

Asymmetric Ene-Reduction by F -Dependent Oxidoreductases B (FDOR-B) from Mycobacterium smegmatis.

作者信息

Kang Suk Woo, Antoney James, Lupton David W, Speight Robert, Scott Colin, Jackson Colin J

机构信息

Research School of Chemistry, Australian National University, Canberra, ACT 2601, Australia.

Natural Products Research Center, Korea Institute of Science and Technology (KIST), Gangneung, 25451 (Republic of, Korea.

出版信息

Chembiochem. 2023 Apr 17;24(8):e202200797. doi: 10.1002/cbic.202200797. Epub 2023 Mar 8.

Abstract

Asymmetric reduction by ene-reductases has received considerable attention in recent decades. While several enzyme families possess ene-reductase activity, the Old Yellow Enzyme (OYE) family has received the most scientific and industrial attention. However, there is a limited substrate range and few stereocomplementary pairs of current ene-reductases, necessitating the development of a complementary class. Flavin/deazaflavin oxidoreductases (FDORs) that use the uncommon cofactor F have recently gained attention as ene-reductases for use in biocatalysis due to their stereocomplementarity with OYEs. Although the enzymes of the FDOR-As sub-group have been characterized in this context and reported to catalyse ene-reductions enantioselectively, enzymes from the similarly large, but more diverse, FDOR-B sub-group have not been investigated in this context. In this study, we investigated the activity of eight FDOR-B enzymes distributed across this sub-group, evaluating their specific activity, kinetic properties, and stereoselectivity against α,β-unsaturated compounds. The stereochemical outcomes of the FDOR-Bs are compared with enzymes of the FDOR-A sub-group and OYE family. Computational modelling and induced-fit docking are used to rationalize the observed catalytic behaviour and proposed a catalytic mechanism.

摘要

近几十年来,烯还原酶催化的不对称还原反应受到了广泛关注。虽然有几个酶家族具有烯还原酶活性,但老黄色酶(OYE)家族受到了最多的科学和工业关注。然而,目前烯还原酶的底物范围有限,立体互补对也很少,因此需要开发一类互补的酶。黄素/脱氮黄素氧化还原酶(FDORs)由于其与OYEs的立体互补性,最近作为生物催化中用于烯还原的酶受到了关注。虽然FDOR-As亚组的酶在这方面已有表征,并报道能对映选择性地催化烯还原反应,但来自同样庞大但更多样化的FDOR-B亚组的酶在这方面尚未得到研究。在本研究中,我们研究了分布在该亚组中的八种FDOR-B酶的活性,评估了它们对α,β-不饱和化合物的比活性、动力学性质和立体选择性。将FDOR-Bs的立体化学结果与FDOR-A亚组的酶和OYE家族的酶进行了比较。使用计算建模和诱导契合对接来合理化观察到的催化行为并提出催化机制。

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