Bi Xiajing, Zheng Lisi, Yang Zhi, Lv Tao, Tong Xiaofei, Chen Yunbo
Department of Neurosurgery, The First Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou, People's Republic of China.
State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, The First Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou, People's Republic of China.
Infect Drug Resist. 2023 Jan 26;16:545-554. doi: 10.2147/IDR.S397544. eCollection 2023.
Although the epidemiology of is important, few studies examining transmission of have been reported, especially in wards with low detection rates, such as neurosurgery departments.
This retrospective study investigated the epidemiology of infection in a neurosurgery department over a 24-month period, particularly examining the transmission of using whole-genome sequencing (WGS).
strains were isolated and identified from fecal samples of neurosurgical patients. Toxigenic strains were typed using multilocus sequence typing, PCR ribotyping and using capillary gel electrophoresis. WGS was used to characterize ST-37/RT017 isolates, and comparative genomic analyses were performed to compare genomic differences between all ST-37 strains from other wards. The susceptibility to 8 antimicrobial agents was examined using the E-test.
Comparative genomic analyses revealed that isolates obtained from neurosurgical patients clustered into two lineages. Only strains s11052403 and s10090304, respectively, isolated from a patient on the 8th floor of the neurosurgery ward and a patient on the 9th floor, were highly similar, exhibiting differences of only two single-nucleotide polymorphisms. All ST-37/RT017 strains isolated from neurosurgical patients were resistant to multiple classes of antibiotics.
There is an urgent need to raise awareness of infection, and epidemiologic surveillance is required to detect clustering and transmission of cases in China. Strict disinfection of the environment is essential to reduce transmission of and achieve effective infection control in the hospital setting.
尽管[病原体名称]的流行病学情况很重要,但很少有关于[病原体名称]传播的研究报道,尤其是在检测率较低的病房,如神经外科病房。
这项回顾性研究调查了神经外科病房24个月期间[病原体名称]感染的流行病学情况,特别是使用全基因组测序(WGS)来检测[病原体名称]的传播。
从神经外科患者的粪便样本中分离并鉴定[病原体名称]菌株。使用多位点序列分型、PCR核糖体分型和毛细管凝胶电泳对产毒菌株进行分型。WGS用于鉴定[病原体名称]ST-37/RT017分离株的特征,并进行比较基因组分析以比较来自其他病房的所有ST-37菌株之间的基因组差异。使用E-test检测对8种抗菌药物的敏感性。
比较基因组分析显示,从神经外科患者分离的菌株聚为两个谱系。仅分别从神经外科病房8楼的一名患者和9楼的一名患者分离出的菌株s11052403和s10090304高度相似,仅表现出两个单核苷酸多态性差异。从神经外科患者分离的所有[病原体名称]ST-37/RT017菌株对多类抗生素耐药。
迫切需要提高对[病原体名称]感染的认识,在中国需要进行流行病学监测以检测[病原体名称]病例的聚集和传播。严格的环境消毒对于减少[病原体名称]的传播和在医院环境中实现有效的感染控制至关重要。