Suppr超能文献

多表位阵列作为非洲猪瘟诊断的关键

Multiepitope array as the key for African Swine Fever diagnosis.

作者信息

Tilocca Bruno, Greco Viviana, Soggiu Alessio, Urbani Andrea, Britti Domenico, Bonizzi Luigi, Buonavoglia Canio, Roncada Paola

机构信息

Department of Health Science, University "Magna Graecia" of Catanzaro, Viale Europa, 88100, Catanzaro, Italy.

Department of Basic Biotechnological Sciences, Intensivological and Perioperative Clinics, Università Cattolica del Sacro Cuore, Largo F. Vito 1, 00168 Rome, Italy; Fondazione Policlinico Universitario Agostino Gemelli, Largo A. Gemelli, 8-00168 Rome, Italy.

出版信息

Vet Immunol Immunopathol. 2023 Mar;257:110548. doi: 10.1016/j.vetimm.2023.110548. Epub 2023 Jan 24.

Abstract

African Swine Fever (ASF) is an acute hemorrhagic fever affecting suids with high mortality and morbidity rate. The causal agent of ASF, the African Swine Fever Virus (ASFV), is an icosahedral virus of 200 nm diameter, composed of an outer envelope layer of host derivation and a linear 170-190 kb long dsDNA molecule. As of today, no efficient therapeutic intervention nor prophylactic measures exist to fight ASFV diffusion, underlining the importance of the early diagnosis and the need for efficient in-field screening of ASF. Recommended guidelines for the diagnosis of ASF are unpracticable in the desirable context of the rapid in-farm screening. In this view, the design of innovative diagnostics based on a panel of multiple ASFV epitopes would amend versatility and the analytical performances of the deliverable, ensuring high quality and accuracy standards worth of implementation in rapid in-field monitoring programs. Pursuing this view, we performed epitope prediction from the major AFSV structural proteins holding the potential to be targeted in innovative rapid diagnostic tests. Selected ASFV structural protein sequences were retrieved from data repositories and their tridimensional structure was computed. Linear and 3D protein structures were subjected to the prediction of the epitope sequences, that are likely to elicit antibody production, by independent bioinformatic tools, providing a list of candidate biomarkers whose batch employment held the potential suitability for the unbiased rapid in-field diagnosis and, in turn, might be implemented in screening programs, crowing the current monitoring and control campaigns that are currently running worldwide.

摘要

非洲猪瘟(ASF)是一种急性出血热,会感染猪科动物,致死率和发病率都很高。ASF的病原体非洲猪瘟病毒(ASFV)是一种直径为200纳米的二十面体病毒,由一层源自宿主的外膜和一个170 - 190千碱基对长的线性双链DNA分子组成。截至目前,尚无有效的治疗干预措施或预防措施来对抗ASFV的传播,这凸显了早期诊断的重要性以及对ASF进行高效现场筛查的必要性。在理想的农场快速筛查环境中,推荐的ASF诊断指南并不实用。从这个角度来看,基于一组多个ASFV表位设计创新诊断方法将改善可交付产品的通用性和分析性能,确保在快速现场监测项目中值得实施的高质量和准确性标准。基于这一观点,我们对主要的AFSV结构蛋白进行了表位预测,这些蛋白有可能成为创新快速诊断测试的靶点。从数据储存库中检索选定的ASFV结构蛋白序列,并计算其三维结构。通过独立的生物信息学工具,对线性和三维蛋白质结构进行表位序列预测,这些序列可能引发抗体产生,从而提供一份候选生物标志物清单,批量使用这些标志物有可能适用于无偏差的快速现场诊断,进而可在筛查项目中实施,丰富目前在全球范围内开展的监测和防控行动。

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验