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ICEGpa1804,一种在副猪嗜血杆菌中鉴定出的携带八个抗性基因的新型整合与接合元件。

ICEGpa1804, a novel integrative and conjugative element carrying eight resistance genes, identified in Glaesserella parasuis.

作者信息

Sun Huarun, Yang Yingying, Yi Kaifang, Zhang Mengke, Luo Xingwei, He Dandan, Hu Gongzheng, Wu Hua

机构信息

Department of Pharmacology and Toxicology, College of Veterinary Medicine, Henan Agricultural University, Zhengzhou, 450046, China; Department of Animal Science, Henan Institute of Science and Technology, Xinxiang, 453000, China.

Department of Pharmacology and Toxicology, College of Veterinary Medicine, Henan Agricultural University, Zhengzhou, 450046, China.

出版信息

Int J Antimicrob Agents. 2023 Apr;61(4):106740. doi: 10.1016/j.ijantimicag.2023.106740. Epub 2023 Feb 2.

Abstract

ICEGpa1804 was identified in the genome of a serovar 2, ST279 isolate EHP1804 carrying eight different resistance genes from 200 Glaesserella parasuis strains isolated from swine with lower respiratory tract infection in seven provinces of China. Susceptibility testing for EHP1804 was determined by broth microdilution, and its genetic profile was determined by whole-genome sequencing. The complete ICEGpa1804 was analysed by polymerase chain reaction, conjugation assay and bioinformatics tools. The conjugation assay was performed using EHP1804 as the donor and G. parasuis V43 (rifampicin-resistant) as the recipient. ICEGpa1804 has a size of 71,880 bp and contains 83 genes, including eight resistance genes [tet(B), bla, aphA1, strA, strB, aac(3)-IId, catA3 and sul2]. The conjugation assay showed that ICEGpa1804 could be transferred to G. parasuis V43 with frequencies of 4.3 × 10. To the best of the authors' knowledge, this is the first study to identify a novel integrative and conjugative element (ICE) carrying eight resistance genes and seven insertion sequence (IS) elements from a G. parasuis isolate. Tn6743, a novel transposon carrying six resistance genes, was identified. Moreover, ISGpa1, a novel IS256 family insertion element, is the first characterized example of a G. parasuis insertion element. Multiple mobile genetic elements involved in resistance genes were located in chromosomal ICEGpa1804, which showed that ICEs may serve as a vital platform for the accumulation of resistance genes.

摘要

ICEGpa1804是在中国七个省份患有下呼吸道感染的猪身上分离出的200株副猪嗜血杆菌菌株中,从携带8种不同抗性基因的血清型2、ST279分离株EHP1804的基因组中鉴定出来的。通过肉汤微量稀释法测定EHP1804的药敏性,并通过全基因组测序确定其基因图谱。利用聚合酶链反应、接合试验和生物信息学工具对完整的ICEGpa1804进行分析。以EHP1804为供体、副猪嗜血杆菌V43(耐利福平)为受体进行接合试验。ICEGpa1804大小为71,880 bp,包含83个基因,其中包括8个抗性基因[tet(B)、bla、aphA1、strA、strB、aac(3)-IId、catA3和sul2]。接合试验表明,ICEGpa1804能够以4.3×10的频率转移至副猪嗜血杆菌V43。据作者所知,这是首次从副猪嗜血杆菌分离株中鉴定出携带8个抗性基因和7个插入序列(IS)元件的新型整合和接合元件(ICE)。鉴定出了携带6个抗性基因的新型转座子Tn6743。此外,新型IS256家族插入元件ISGpa1是副猪嗜血杆菌插入元件的首个特征化实例。多个与抗性基因相关的移动遗传元件位于染色体ICEGpa1804中,这表明ICEs可能是抗性基因积累的重要平台。

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