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协同受体的合理设计

On the Rational Design of Cooperative Receptors.

机构信息

Precision Medicine and Metabolism Laboratory, CIC bioGUNE, Derio, Spain.

Ikerbasque, Basque Foundation for Science, Bilbao, Spain.

出版信息

Annu Rev Biophys. 2023 May 9;52:319-337. doi: 10.1146/annurev-biophys-091222-082247. Epub 2023 Feb 3.

Abstract

Cooperativity (homotropic allostery) is the primary mechanism by which evolution steepens the binding curves of biomolecular receptors to produce more responsive input-output behavior in biomolecular systems. Motivated by the ubiquity with which nature employs this effect, over the past 15 years we, together with other groups, have engineered this mechanism into several otherwise noncooperative receptors. These efforts largely aimed to improve the utility of such receptors in artificial biotechnologies, such as synthetic biology and biosensors, but they have also provided the first quantitative, experimental tests of longstanding ideas about the mechanisms underlying cooperativity. In this article, we review the literature on the design of this effect, paying particular attention to the design strategies involved, the extent to which each can be rationally applied to (and optimized for) new receptors, and what each teaches us about the origins and optimization of this important phenomenon.

摘要

协同性(同变变构作用)是进化使生物分子受体的结合曲线变陡的主要机制,从而在生物分子系统中产生更敏感的输入-输出行为。受自然界广泛应用这种效应的启发,在过去的 15 年里,我们与其他研究小组一起,将这种机制引入了几种原本不具有协同性的受体中。这些努力主要旨在提高这些受体在人工生物技术(如合成生物学和生物传感器)中的实用性,但它们也首次对协同性背后的机制的一些长期观点进行了定量、实验检验。在本文中,我们回顾了关于这种效应设计的文献,特别关注所涉及的设计策略、每种策略在多大程度上可以合理地应用于(并针对)新受体进行优化,以及每种策略使我们对这一重要现象的起源和优化有哪些了解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f7a/11824748/bce2351dba90/nihms-2054682-f0001.jpg

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