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来自海洋细菌河口文营庄氏菌的一种内切-1,3-岩藻聚糖酶的特性:新型糖苷水解酶家族GH174的首个成员

Characterization of an endo-1,3-fucanase from marine bacterium Wenyingzhuangia aestuarii: The first member of a novel glycoside hydrolase family GH174.

作者信息

Liu Guanchen, Shen Jingjing, Chang Yaoguang, Mei Xuanwei, Chen Guangning, Zhang Yuying, Xue Changhu

机构信息

College of Food Science and Engineering, Ocean University of China, 5 Yushan Road, Qingdao 266003, China.

College of Food Science and Engineering, Ocean University of China, 5 Yushan Road, Qingdao 266003, China; Laboratory for Marine Drugs and Bioproducts, Pilot National Laboratory for Marine Science and Technology (Qingdao), Qingdao 266237, China.

出版信息

Carbohydr Polym. 2023 Apr 15;306:120591. doi: 10.1016/j.carbpol.2023.120591. Epub 2023 Jan 16.

DOI:10.1016/j.carbpol.2023.120591
PMID:36746582
Abstract

Sulfated fucans are important marine polysaccharides with various biological and biomedical activities. Fucanases are favorable tools to establish the structure-activity relationships of sulfated fucans. Herein, gene fun174A was discovered from the genome of marine bacterium Wenyingzhuangia aestuarii OF219, and none of the pre-defined glycosidic hydrolase domains were predicted in the protein sequence of Fun174A. Recombinant Fun174A demonstrated a low optimal reaction pH at 5.5. It might degrade sulfated fucans in an endo-processive manner. Glycomics and NMR analyses proved that it specifically hydrolyzed α-1,3-l-fucoside bonds between 2-O-sulfated and non-sulfated fucose residues in the sulfated fucan from sea cucumber Isostichopus badionotus. D119, E120 and E218 were critical for the activity of Fun174A, as identified by site-directed mutagenesis. Three homologs of Fun174A were confirmed to exhibit endo-1,3-fucanase activities. The novelty on sequences of Fun174A and its homologs reveals a new glycoside hydrolase family, GH174.

摘要

硫酸化岩藻聚糖是具有多种生物学和生物医学活性的重要海洋多糖。岩藻聚糖酶是建立硫酸化岩藻聚糖构效关系的有利工具。在此,从海洋细菌河口文营庄氏菌OF219的基因组中发现了基因fun174A,在Fun174A的蛋白质序列中未预测到任何预定义的糖苷水解酶结构域。重组Fun174A在pH 5.5时表现出较低的最佳反应pH值。它可能以内切加工的方式降解硫酸化岩藻聚糖。糖组学和核磁共振分析证明,它特异性水解来自糙海参的硫酸化岩藻聚糖中2-O-硫酸化和非硫酸化岩藻糖残基之间的α-1,3-L-岩藻糖苷键。通过定点诱变确定,D119、E120和E218对Fun174A的活性至关重要。已证实Fun174A的三个同源物具有内切1,3-岩藻聚糖酶活性。Fun174A及其同源物序列的新颖性揭示了一个新的糖苷水解酶家族,即GH174。

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Characterization of an endo-1,3-fucanase from marine bacterium Wenyingzhuangia aestuarii: The first member of a novel glycoside hydrolase family GH174.来自海洋细菌河口文营庄氏菌的一种内切-1,3-岩藻聚糖酶的特性:新型糖苷水解酶家族GH174的首个成员
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