Calderon Alexander, Mestvirishvili Tamara, Boccalatte Francesco, Ruggles Kelly, David Gregory
bioRxiv. 2023 Mar 18:2023.01.23.525185. doi: 10.1101/2023.01.23.525185.
To maintain blood homeostasis, millions of terminally differentiated effector cells are produced every day. At the apex of this massive and constant blood production lie hematopoietic stem cells (HSCs), a rare cell type harboring unique self-renewal and multipotent properties. A key feature of HSCs is their ability to temporarily exit the cell cycle in a state termed quiescence. Defective control of cell cycle progression can eventually lead to bone marrow failure or malignant transformation. Recent work in embryonic stem cells has suggested that cells can more robustly respond to differentiation cues in the early phases of the cell cycle, owing to a discrete chromatin state permissive to cell fate commitment. However, the molecular mechanisms tying cell cycle re-entry to cell fate commitment in adult stem cells such as HSCs remain elusive. Here, we report that the chromatin-associated Sin3B protein is necessary for HSCs' commitment to differentiation, but dispensable for their self-renewal or survival. Transcriptional profiling of hematopoietic stem and progenitor cells (HSPCs) genetically inactivated for Sin3B at the single cell level reveals aberrant cell cycle gene expression, correlating with the defective engagement of discrete signaling programs. In particular, the loss of Sin3B in the hematopoietic compartment results in aberrant expression of cell adhesion molecules and essential components of the interferon signaling cascade in LT-HSCs. Finally, chromatin accessibility profiling in LT-HSCs suggests a link between Sin3B-dependent cell cycle progression and priming of hematopoietic stem cells for differentiation. Together, these results point to controlled progression through the G1 phase of the cell cycle as a likely regulator of HSC lineage commitment through the modulation of chromatin features.
为维持血液内稳态,每天会产生数百万终末分化的效应细胞。在这种大量且持续的血液生成过程的顶端是造血干细胞(HSC),这是一种罕见的细胞类型,具有独特的自我更新和多能性。造血干细胞的一个关键特征是它们能够以一种称为静止的状态暂时退出细胞周期。细胞周期进程的控制缺陷最终可能导致骨髓衰竭或恶性转化。最近在胚胎干细胞方面的研究表明,由于一种允许细胞命运决定的离散染色质状态,细胞在细胞周期的早期阶段能够更有力地响应分化信号。然而,在诸如造血干细胞等成体干细胞中,将细胞周期重新进入与细胞命运决定联系起来的分子机制仍然不清楚。在这里,我们报告染色质相关蛋白Sin3B对于造血干细胞向分化的定向分化是必需的,但对于它们的自我更新或存活是可有可无的。在单细胞水平对基因敲除Sin3B的造血干祖细胞(HSPC)进行转录谱分析,发现细胞周期基因表达异常,这与离散信号程序的缺陷参与相关。特别是,造血系统中Sin3B的缺失导致长期造血干细胞中细胞粘附分子和干扰素信号级联的关键成分表达异常。最后,长期造血干细胞中的染色质可及性分析表明,Sin3B依赖的细胞周期进程与造血干细胞分化的启动之间存在联系。总之,这些结果表明,通过细胞周期的G1期进行受控进展可能是通过调节染色质特征来调控造血干细胞谱系定向分化的一个因素。