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(石珊瑚目,鹿角珊瑚科)的完整线粒体基因组。

The complete mitochondrial genome of (Scleractinia, Acroporidae).

作者信息

Wang Wei, Cao Bingbing, Xu Ziqing, Jia Zhiyu, Yu Shuangen, Tian Peng, Niu Wentao, Xiao Jiaguang

机构信息

Third Institute of Oceanography, Ministry of Natural Resources, Xiamen, China Third Institute of Oceanography, Ministry of Natural Resources Xiamen China.

Key Laboratory of Mariculture of Ministry of Education, College of Fisheries, Ocean University of China, Qingdao, China Key Laboratory of Mariculture of Ministry of Education, College of Fisheries, Ocean University of China Qingdao China.

出版信息

Biodivers Data J. 2022 Sep 13;10:e91531. doi: 10.3897/BDJ.10.e91531. eCollection 2022.

Abstract

Veron, 2000 (Cnidaria, Anthozoa, Scleractinia, Acroporidae) is an uncommon, but distinctive species of stony coral. The complete mitochondrial genome of was sequenced in this study for the first time, based on 32 pairs of primers newly designed according to seven species in the family Acroporidae. The mitogenome of has a circular form and is 17,885 bp long, including 13 protein-coding genes (PCGs), 2 tRNA (tRNA, tRNA), 2 rRNA genes and a putative control-region. The base composition of the complete mitogenome was 24.8% A, 14.2% C, 24.2% G and 36.8% T, with a higher AT content (61.6%) than GC content (38.4%). Based on 13 protein-coding genes, a Maximum Likelihood phylogenetic analysis showed that is clustered in the genus which belongs to the family Acroporidae. More stony coral species should be sequenced for basic molecular information and to help confirm the taxonomic status and evolutionary relationships of Scleractinia in the future.

摘要

维罗石珊瑚(Veron,2000年描述,刺胞动物门,珊瑚纲,石珊瑚目,鹿角珊瑚科)是一种不常见但独特的石珊瑚物种。本研究首次对其完整的线粒体基因组进行了测序,测序依据的是根据鹿角珊瑚科七个物种新设计的32对引物。维罗石珊瑚的线粒体基因组呈环状,长度为17,885 bp,包括13个蛋白质编码基因(PCGs)、2个转运RNA(tRNA,tRNA)、2个核糖体RNA基因和一个假定的控制区。完整线粒体基因组的碱基组成为24.8%的A、14.2%的C、24.2%的G和36.8%的T,AT含量(61.6%)高于GC含量(38.4%)。基于13个蛋白质编码基因的最大似然系统发育分析表明,维罗石珊瑚聚类在鹿角珊瑚科的鹿角珊瑚属中。未来应测序更多的石珊瑚物种以获取基础分子信息,并有助于确定石珊瑚目的分类地位和进化关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d752/9848517/729da4e2650c/bdj-10-e91531-g001.jpg

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