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来自中国浙江省的螽斯科、驼螽科和蟋螽科(螽斯科、灶马蟋科和蟋螽科)昆虫的DNA条形码文库。

A DNA barcode library for katydids, cave crickets, and leaf-rolling crickets (Tettigoniidae, Rhaphidophoridae and Gryllacrididae) from Zhejiang Province, China.

作者信息

Zhao Yizheng, Wang Hui, Huang Huimin, Zhou Zhijun

机构信息

Key Laboratory of Zoological Systematics and Application of Hebei Province, College of Life Sciences, Hebei University, Baoding, Hebei 071002, China Hebei University Baoding China.

出版信息

Zookeys. 2022 Oct 5;1123:147-171. doi: 10.3897/zookeys.1123.86704. eCollection 2022.

Abstract

Barcode libraries are generally assembled with two main objectives in mind: specimen identification and species discovery/delimitation. In this study, the standard COI barcode region was sequenced from 681 specimens belonging to katydids (Tettigoniidae), cave crickets (Rhaphidophoridae), and leaf-rolling crickets (Gryllacrididae) from Zhejiang Province, China. Of these, four COI-5P sequences were excluded from subsequent analyses because they were likely NUMTs (nuclear mitochondrial pseudogenes). The final dataset consisted of 677 barcode sequences representing 90 putative species-level taxa. Automated cluster delineation using the Barcode of Life Data System (BOLD) revealed 118 BINs (Barcodes Index Numbers). Among these 90 species-level taxa, 68 corresponded with morphospecies, while the remaining 22 were identified based on reverse taxonomy using BIN assignment. Thirteen of these morphospecies were represented by a single barcode (so-called singletons), and each of 19 morphospecies were split into more than one BIN. The consensus delimitation scheme yielded 55 Molecular Operational Taxonomic Units (MOTUs). Only four morphospecies ( > DNN) failed to be recovered as monophyletic clades (i.e., , , and ), so it is speculated that these may be species complexes. Therefore, the diversity of katydids, cave crickets, and leaf-rolling crickets in Zhejiang Province is probably slightly higher than what current taxonomy would suggest.

摘要

条形码文库的构建通常有两个主要目的

标本鉴定和物种发现/界定。在本研究中,对来自中国浙江省的681个螽斯(螽斯科)、洞蟋(驼螽科)和卷叶蟋(蟋螽科)标本的标准细胞色素氧化酶亚基I(COI)条形码区域进行了测序。其中,4个COI-5P序列被排除在后续分析之外,因为它们可能是核线粒体假基因(NUMTs)。最终数据集由677个条形码序列组成,代表90个假定的物种水平分类单元。使用生命条形码数据系统(BOLD)进行自动聚类划分,共得到118个条形码索引号(BINs)。在这90个物种水平分类单元中,68个与形态物种相对应,其余22个是根据BIN分配通过逆向分类法确定的。这些形态物种中有13个由单个条形码代表(即所谓的单例),19个形态物种中的每一个都被分成了多个BIN。一致的划分方案产生了55个分子操作分类单元(MOTUs)。只有4个形态物种(> DNN)未能作为单系类群恢复(即, 、 、 和 ),因此推测这些可能是物种复合体。因此,浙江省螽斯、洞蟋和卷叶蟋的多样性可能略高于当前分类学所显示的水平。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bcc/9836636/2d3649b70ccc/zookeys-1123-147_article-86704__-g001.jpg

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